Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01576 ATGGGTTGGAAAGCAGCTGAGAAACTCATTAGGCACTGGAAAGTTCTCAGAGGGGATAATGGTGAGACTGGGACGATTAAGCGCGTTATTCGCTCTCAGAATCGCGTTATTGTTGAGGGTAAAAATCTGGTGAAGAAGCATATCAAGCAAGGGCAAGGTCATGAAGGGGGCATCTTTGCAGTGGAAGCCCCAATCCATGCCTCCAATGTGCAAGTTCTTGATCCAGTGACAGGGAAGCCTTGCAAGGTTGGAGTTAAATATCTTGAAGATGGTACTAAAGTCAGGGTATCCAGAGGAATAGGAGCATCTGGGTCCATAATCCCTCGTCCTGAGATCTTAAAGATAAGAACTACCCCACGACCTACTGTCCTTGGTCCAAAAGATACTCCAATGGATCTTGTGTTAGAGAAGACTTACGATGCTAAAACAGGAAGGGGAATGCCTGAGCTTTAA 453 0.4592 MGWKAAEKLIRHWKVLRGDNGETGTIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFAVEAPIHASNVQVLDPVTGKPCKVGVKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPTVLGPKDTPMDLVLEKTYDAKTGRGMPEL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01576 150 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 42 99 IPR003256 GO:0003735|GO:0005840|GO:0006412
Spst8g01576 150 SUPERFAMILY Translation proteins SH3-like domain 10 99 IPR008991 -
Spst8g01576 150 Hamap 50S ribosomal protein L24 [rplX]. 5 98 IPR003256 GO:0003735|GO:0005840|GO:0006412
Spst8g01576 150 Gene3D - 13 103 IPR014722 -
Spst8g01576 150 NCBIfam 50S ribosomal protein L24 14 98 IPR003256 GO:0003735|GO:0005840|GO:0006412
Spst8g01576 150 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 3 140 IPR003256 GO:0003735|GO:0005840|GO:0006412
Spst8g01576 150 CDD KOW_RPL26 14 72 IPR041988 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01576 Spst-Chr8 17988040 17990175 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01576 K02895 - gmx:100305917 286.574