Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01575 ATGCGACGCACTCATCCCTCCATCCATTTCCTCGCCGCCACCGACACCCGGGCGGCTACAGCCACAGCAACCTCATTGTCTTCACGCCAACCCCATCGAGGACGCGGTAGAGGCTTCTCCGGCGGCAGAGGTCACGCTGTCTCCGGTGACGCGCACTTAGGCTCGGTCCGCGATGCCAATTTAGGACTCCTACGAGGAGAGAGTGAAAGCTTCGCGAACCAAACTCCGTATCATCAGAGTCCATCGTATAGTTCAAGGCCTCATCCGCCACCGCCTCACCATCGCCAGCCTCAGTTCCGTCCCCCTCCGCCGCAGTTTCGGCTGCCTCCTCCGCCGCCGTTTCGGCAGCCTCCTCCACCGCAGTTTCGGCAGCCTCCTCCACCGCAGTTTCCGCAGCATCCTCCGCTGCAGTTTCGGCAGAATCCTCCGCCGGAATATCGTCCGGCGTTTCGTCGTCCGAAGCATCTCCGGGAGAGGCCGCCGGATTATCGAGACTGGGAGCTTGTCCTGACGCCGCCACCGCCTCCTCATGGTAACCTCACTCTTGTGCTGTGTGATGGTGACTTAGGTTTCTACCTTAGGATTAAGAAAACAAATCAAAACGCCATTAAGGAACAATTTCAGATGAGTAGTTTGGTAAATGGCTCTTGCTTCGCGTGCAATTTCACAACGGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTAGCTTTGGACCACCGGAACAAACTTTATTTTCACATACCTCCATACATTTTGGACTGGCACCGGAGAAAGAGAAGCATACTTTTTGAGTTGGGGCTTTGGTCAGCTGATATCTTGTGTTTGCAGGAGGTTGATAGATTTCATGAGTTGGCAGAGGAGTTGAAGCCTAAGGGATACAGTGGTATCTGGAAGGTTGGTAATCCAGTTGATGGCTGTGCAATCTTTTGGCAAAAATCTAGGTTCAATTTCCTATATGAAGAATGCATTGAGTTTAATAAGATGGGACTTAGGGACAATGTCGCTCAACTATGTGTACTAGAGGAACAGGAACAGAGACCTGTGGTTGTCAGAAATCACCAGGCTCAGCCACAATATTGGCAAGCTGTGAGGTCACGAGTTGGCTTGAAACAGAGCATGTCAGGCTCTCGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTACAATCCTAACAGGGGAGAAATTAAGCTTGGCCAGGTTCGAGTGCTACTTGAAAAGGCTAAAGCTCTTTCTAAACTCTGGAATAATGCCCCTATAGTTATTTGTGGGGATTTTAATTGTACACCCAAGAGTCCATTATACAACTTTATATCAGAACAGAAGATAGATCTGTCTGGAATAGATAGGAATAAGGTATCCGGACAAGATTCTGCAATTCGTGCATCAAAGCCCTATTATGGTCCTAAGGCTAGTGAAATATCTGCCAGTGGTTCAGTTCAGGCCACGTTCACTGGAGGTGTCAAGGAAGTTGTTGAACAAAATACTTATCAGTCAGACAGGACCGACCTGGACACTAAATGTCACCATCTGGATAACAAAGGTACTCACCCTCTTTTGGATATGTCTATCAAGTCTTGTTCAAATCTTGAGTTTGGAAAGGAAAATGATGCATTTGCAGGAAAAGATACTGATGAAACTGCTGTTGACCATTCAAAGATCTTTTGTGAAGATCGTAGTATAAAAGAACCAGATCCTTCTTATAGGGAAGGTAGGTCCCATATTAGTCCTGTAAATAATGCTATTCATGACATTACACCTGTGACCTCTTCAGCTCCTGAAGCAGTTAACAGTGAAAAAACTGGGAAGGGAAGCAATGAACATATATCAGATGCTGTCCCAATTTCAAATAAAGAATTAAGCAAAAAATCCAACTTCCATGTCCCTGAAGGGAATAAACAAGTGGAGTCAACAGATCTAGACATCGTAGAAATTTCTCCAACTAAACCATCAAGCCAAACTTCAGTTTCCAATGCATTTGAAGTCCCTCGTATAGAGTATGGAGATAACCCTTCTCATGAGGAAATTGCTGATGATCAAAATAACAGCTCATCAACCGCATATTTAGTTGGCAAATCACATCGATTGTCAAACATTAACTTTCCTCCACTAGATGAAAAAGAGAAATCATTCTTTGATGAGATAGATGAAACCATTACAAACAGTGAAAATATTGGTGATGACAGCAGTTTTGTATCTTCCTTACATAATGCTGAAGGAGTTGGTCTTGATATCGGATCATCAATGAAATCAGATCTTGATAAGTCTTATCAGTACGATGAATTAAATTCTGCTTCCAACTTGTTGCTGCCTGTAGAGAGCAATGAAGGGGAGGATGATTTATCTCCAAATCAGATTTCTAAATCTATTTGTACAGAGGAAGCTACTTATAATCCAGCATTGTGGACCCCTATGGAGATAGAAACTGCTACAGGAAATGCAGATTGCACCTTCTTGGAGCACCCTTTACTGCTTAGGAGCACATACACTGAAGCTATGGATTGTTCAGGGACCAGAGATCACCATGGAGAGCCCCTTGTAACCAGTTATAATAGGCGCTTCTCGGGAACTGTTGACTACATTTGGTAG 2598 0.448 MRRTHPSIHFLAATDTRAATATATSLSSRQPHRGRGRGFSGGRGHAVSGDAHLGSVRDANLGLLRGESESFANQTPYHQSPSYSSRPHPPPPHHRQPQFRPPPPQFRLPPPPPFRQPPPPQFRQPPPPQFPQHPPLQFRQNPPPEYRPAFRRPKHLRERPPDYRDWELVLTPPPPPHGNLTLVLCDGDLGFYLRIKKTNQNAIKEQFQMSSLVNGSCFACNFTTERFKVLSYNILADYLALDHRNKLYFHIPPYILDWHRRKRSILFELGLWSADILCLQEVDRFHELAEELKPKGYSGIWKVGNPVDGCAIFWQKSRFNFLYEECIEFNKMGLRDNVAQLCVLEEQEQRPVVVRNHQAQPQYWQAVRSRVGLKQSMSGSRKVVVCNIHVLYNPNRGEIKLGQVRVLLEKAKALSKLWNNAPIVICGDFNCTPKSPLYNFISEQKIDLSGIDRNKVSGQDSAIRASKPYYGPKASEISASGSVQATFTGGVKEVVEQNTYQSDRTDLDTKCHHLDNKGTHPLLDMSIKSCSNLEFGKENDAFAGKDTDETAVDHSKIFCEDRSIKEPDPSYREGRSHISPVNNAIHDITPVTSSAPEAVNSEKTGKGSNEHISDAVPISNKELSKKSNFHVPEGNKQVESTDLDIVEISPTKPSSQTSVSNAFEVPRIEYGDNPSHEEIADDQNNSSSTAYLVGKSHRLSNINFPPLDEKEKSFFDEIDETITNSENIGDDSSFVSSLHNAEGVGLDIGSSMKSDLDKSYQYDELNSASNLLLPVESNEGEDDLSPNQISKSICTEEATYNPALWTPMEIETATGNADCTFLEHPLLLRSTYTEAMDCSGTRDHHGEPLVTSYNRRFSGTVDYIW 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01575 865 MobiDBLite consensus disorder prediction 1 53 - -
Spst8g01575 865 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 197 865 - -
Spst8g01575 865 MobiDBLite consensus disorder prediction 17 31 - -
Spst8g01575 865 MobiDBLite consensus disorder prediction 73 157 - -
Spst8g01575 865 Pfam Endonuclease/Exonuclease/phosphatase family 230 444 IPR005135 GO:0003824
Spst8g01575 865 SUPERFAMILY DNase I-like 213 447 IPR036691 -
Spst8g01575 865 Gene3D Endonuclease/exonuclease/phosphatase 219 517 IPR036691 -
Spst8g01575 865 Gene3D Endonuclease/exonuclease/phosphatase 760 865 IPR036691 -
Spst8g01575 865 MobiDBLite consensus disorder prediction 83 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01575 Spst-Chr8 17977222 17983902 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01575 - - vun:114194208 1046.57