Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01533 ATGGGCACCAAGGTCAGGAGACCCTCCCATGCTGGCTCTTGGTACACCGACAATCCTAAGCAGCTTTCAGAGGAACTTGAAGGGTGGTTACAATCGTGTGGTTTGGCCAAGTCTCCTGAGGTGCGGGGAGTGATAGCACCACATGCTGGTTATTCGTATTCAGGAAGAGCTGCTGCTTATGCCTTTGGAAACATTGATCCATCAAGCATTACGCGCGTGTTCCTTCTTGGTCCTTCTCATCACTATTACACTCCAAAGTGTGCACTTTCAACTGCAACTGTCTACAAGACACCCATAGGTGACCTGCCTATTGATTTCGAAGTAATTGAGGAGCTTAAAGCTACAGGGAAATTTGAACTGATGGATATTCGTGTTGATGAAGCTGAACATAGCATGGAAATGCACTTGCCATATCTTGCTAAAGTATTTGAAGGGCACCAGGTGAAAATTGTGCCCATTTTAGTCGGTGCTGTTAGTGCTGAAAATGAAGCTATATATGGACAGATCCTTGCCAAATATGTAGATAATCCTAATAACTTCTTCTCTATCTCATCAGACTTTTGTCACTGGGGATCTCGATTCAATTACATGCACTATGACAAGAAGCACGGGCCTATATACAAATCTATTGAGGCCCTAGACAAGATGGGTATGGATATCATAGAAACAGGAGATCCAGATTCATTCAAACAATATCTGCTGGAGTATGACAATACAATATGTGGAAGACATCCAATTAGTGTTTTTCTTCATATGCTGAAGAACAGCTCAACAAAGATAAAAATAAAATTTCTTCGCTATGAGCAGTCTAGCCAGTGCAAAAGTACCAGGGATAGTAGTGTTAGTTATGCATCTGCGGCAGCAAAAACTGATGATTCGAGCTCTAGTTGA 891 0.4231 MGTKVRRPSHAGSWYTDNPKQLSEELEGWLQSCGLAKSPEVRGVIAPHAGYSYSGRAAAYAFGNIDPSSITRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPIDFEVIEELKATGKFELMDIRVDEAEHSMEMHLPYLAKVFEGHQVKIVPILVGAVSAENEAIYGQILAKYVDNPNNFFSISSDFCHWGSRFNYMHYDKKHGPIYKSIEALDKMGMDIIETGDPDSFKQYLLEYDNTICGRHPISVFLHMLKNSSTKIKIKFLRYEQSSQCKSTRDSSVSYASAAAKTDDSSSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01533 296 CDD MEMO_like 7 278 IPR002737 -
Spst8g01533 296 NCBIfam AmmeMemoRadiSam system protein B 6 287 - -
Spst8g01533 296 Hamap MEMO1 family protein <locus_tag>. 4 289 IPR002737 -
Spst8g01533 296 Pfam Memo-like protein 8 286 IPR002737 -
Spst8g01533 296 Gene3D - 4 290 - -
Spst8g01533 296 PANTHER PROTEIN MEMO1 4 289 IPR002737 -
Spst8g01533 296 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01533 Spst-Chr8 16447109 16451208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01533 K06990 - gmx:100815790 545.043