Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01509 ATGGCTTCTTCAGTTCTCTCCGCAGCTTCGCACTCTTTCTCTCCCTCCTCTTCTCTCTGCTCGCGCCAAACCCACAAGGGGAAGCCCAAGATTGGAGGCAACACTTTGAGATTTAACAAAGGACTCAATTCCTTTCCACATGCAAGGTCTAGTGGTCGGATCTCTATGGCTGTTGCGGTTAATGTTTCTCGGTTTGAGGGCATACCTATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAGGCATTCAAAGCGGACACAAGTGATGTTAAGCTCAATCTTGGCGTAGGGGCGTACAGAACTGAAGAATTACAGCCATACGTTCTTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGGGGGGATAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCATTTAATAAGGCAACTGCAGAGTTGTTACTTGGAGCAGGCAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCCGGAACTGGTTCTCTGCGGCTAGGTGCAGCTCTGATAGAAAGATATTTTGCTGGGGCAAAAGTTTTGATTTCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTCCCATGGTCTGAGTACCGATATTATGATCCCAAGACAGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCTGAAGGATCTTTTGTGGTACTGCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCTGAACAGTGGGAAAAAATAGCTGATGTAATTCAAGAAAAAAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGCTTTGCTAGTGGAAGCCTGGATGAAGATGCAGCTTCTGTGAGACTGTTTGTTGCACGTGGTATGGAGGTTCTTGTGGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCCTCATCCCCAGAATCAGCAGCAAGGGTAAAGAGCCAGTTGAAAAGGCTTGCCCGACCAATGTATTCTAATCCACCTGTACACGGGGCTAGAATTGTTGCCGATGTTGTTGGAAACCCAGTTCTCTTTAATGAATGGAAAGCAGAGATGGAAATGATGGCTGGAAGGATCAAGAATGTTAGACAGCAGCTATACAATAGTATTACTTCAAAAGACAATAGTGGAAAAGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGGACCAGAGTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCTAAATGTGAATACCTTGCAGATGCCATTATAGACTCATATCATAATGTCAGCTGA 1398 0.4399 MASSVLSAASHSFSPSSSLCSRQTHKGKPKIGGNTLRFNKGLNSFPHARSSGRISMAVAVNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGAGNPAIKQQRVATVQGLSGTGSLRLGAALIERYFAGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFVVLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRLARPMYSNPPVHGARIVADVVGNPVLFNEWKAEMEMMAGRIKNVRQQLYNSITSKDNSGKDWSFILKQIGMFSFTGLNKDQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01509 465 PANTHER ASPARTATE AMINOTRANSFERASE 58 463 IPR000796 GO:0006520|GO:0008483
Spst8g01509 465 PRINTS Aspartate aminotransferase signature 238 257 IPR000796 GO:0006520|GO:0008483
Spst8g01509 465 PRINTS Aspartate aminotransferase signature 406 424 IPR000796 GO:0006520|GO:0008483
Spst8g01509 465 PRINTS Aspartate aminotransferase signature 337 362 IPR000796 GO:0006520|GO:0008483
Spst8g01509 465 PRINTS Aspartate aminotransferase signature 269 281 IPR000796 GO:0006520|GO:0008483
Spst8g01509 465 Gene3D - 123 364 IPR015421 GO:0003824
Spst8g01509 465 Pfam Aminotransferase class I and II 91 457 IPR004839 GO:0009058|GO:0030170
Spst8g01509 465 FunFam Aspartate aminotransferase 123 364 - -
Spst8g01509 465 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Spst8g01509 465 Gene3D Aspartate Aminotransferase, domain 1 68 457 IPR015422 GO:0003824
Spst8g01509 465 MobiDBLite consensus disorder prediction 1 35 - -
Spst8g01509 465 SUPERFAMILY PLP-dependent transferases 63 459 IPR015424 -
Spst8g01509 465 CDD AAT_like 92 457 - -
Spst8g01509 465 MobiDBLite consensus disorder prediction 1 24 - -
Spst8g01509 465 FunFam Aspartate aminotransferase 351 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01509 Spst-Chr8 15960975 15965621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01509 K00811 - gmx:547792 850.506