Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01457 ATGCAGATACACACAACGCTTCCCTTTGCACGCACTCCAACAAGGGTCCCTCACCTCATGCCGCCACCCAAATCCGCCCTTTCGGTCTCACCACAGCCGCTCAAAGAGCGGAGGACCCACTCCATGCCTCCTGAAAAGTTAGAGGTTTTCAGGTCGCTGGAGGGCTGGGCCTCGCAGTGGGTCCTACCCCTGCTGAAGCCCGTCGAGAAAAGTTGGCAGCCCGAAAGTTTCGTCCCCGACCCGTCGTTGCCGTTCGAAGAGTTCGTGGATGAGGTCAAGGCTCTCCGCGACCGCACCAAGGAGCTATCCGACGAGTACTTCTTGGTGTTAGTAGGTGACATGATCACAGAGGAAGCGCTTCCCACTTACCAGACCATAATGAACAGCCTCGACGGTGTGAAAGACGAGTACGGAACATGCCCAAGCCCGTGGGCCGTATGGACTCGGGCCTGGTCCGCCGAAGAAAACAGACATGGGGATTTACTCAGAACTTACTTGTACCTTTCTGGTCGTGTTGACATGAAGATGATCGAAAAGACCATTCAGTACCTCATTGCCGCTGGCATGGACCCTGGTTTCGAGAACAACCCGTACCTGGGGTATGTGTACACGTCATTCCAAGAGCGAGCGACGTTCGTGTCGCACGGGAACACGGCTCGGCTTGCGAAGGAGTGCGGTGATCCAGTGCTGGCGCGCGTATGCGGAGCCATTGCCGCGGACGAGAAGCGGCACGAGAAGGCGTACTCAAGGATCGTGGAGAAGCTTCTAGAAGTGGACCCGACCGGAGCAATGGTGGCCATAGGAACCATGTTGGAGAGAAAGATCACGATGCCGGCGCACCTTATGTACGATGGAGAGGACCCCAAGCTATTCGAGCACTACGCGGCGGTGGCGCAGCGTGTGGGCGTGTACACGGCCAACGACTATGCGAACATCTTGGAGTTTCTGATCGGACAGTGGAGGTTGGAGAAGCTGGAAGGTTTGACGGGAGAGGGAAAGCGGGCGCAGGATTACGTGTGCGGGTTAGCACCGAGGATTAGGAAGTTGCAAGAACGCGCTGATGAGCGAGCGCGTAAGATGAAACCTCGTGGCGTGAAGTTCAGCTGGATCTTCAATAAAGAGGTGCATTTAATTATTGGAAGAGGTTTACGAGACTTTGAAGAATTTCAAAAGTCTTATGGGCTGAAACAACTTAGTCTTGAGTGGTATGAAGCTGACCTAGGCCTTTCAATATCCCTTGATATCATGATGCAGCTTAGCTTCGAAACCAGCGTCACCCTTTCGATTATATGGGACTGA 1299 0.5427 MQIHTTLPFARTPTRVPHLMPPPKSALSVSPQPLKERRTHSMPPEKLEVFRSLEGWASQWVLPLLKPVEKSWQPESFVPDPSLPFEEFVDEVKALRDRTKELSDEYFLVLVGDMITEEALPTYQTIMNSLDGVKDEYGTCPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVDMKMIEKTIQYLIAAGMDPGFENNPYLGYVYTSFQERATFVSHGNTARLAKECGDPVLARVCGAIAADEKRHEKAYSRIVEKLLEVDPTGAMVAIGTMLERKITMPAHLMYDGEDPKLFEHYAAVAQRVGVYTANDYANILEFLIGQWRLEKLEGLTGEGKRAQDYVCGLAPRIRKLQERADERARKMKPRGVKFSWIFNKEVHLIIGRGLRDFEEFQKSYGLKQLSLEWYEADLGLSISLDIMMQLSFETSVTLSIIWD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01457 432 Coils Coil 85 105 - -
Spst8g01457 432 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 29 377 - -
Spst8g01457 432 CDD Acyl_ACP_Desat 45 353 IPR005067 GO:0006631|GO:0045300
Spst8g01457 432 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 30 375 IPR005067 GO:0006631|GO:0045300
Spst8g01457 432 Gene3D Ribonucleotide Reductase, subunit A 29 377 IPR012348 GO:0016491
Spst8g01457 432 MobiDBLite consensus disorder prediction 1 40 - -
Spst8g01457 432 Pfam Fatty acid desaturase 45 371 IPR005067 GO:0006631|GO:0045300
Spst8g01457 432 SUPERFAMILY Ferritin-like 34 376 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01457 Spst-Chr8 13712398 13717278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01457 11 377 Acyl Lipid Metabolism Gene Families AT1G43800 69.022 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01457 K03921 - gmx:100816146 634.024