Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01456 ATGCAGATACGACCCTGCCACTCCATCACCACCCAAACCGTTTTTCCATGGGCTTATAAAAACATGTGCCACCGGCAACACCGCCACCTCTTGCCGCCGCCTAATGCCGCCGTCTCTGCAGCGCCATTTAAGGCGCGGAGGACCCACTCAATGCCGGCAGAAAAGATGGAGATTTTCAGGTCGTTGGAGGGTTGGGCCTCGCAGTGGGTCCTACCGCTGCTGAAGCCCGTGGAGCAATGCTGGCAGCCCCAGAACTTTGTCCCCGACTCGACGCTGCCGTTCGAAGAGTTCAGCGAGGAAGTGAAGGTCCTTCGTGAACGCACGAAGGAGCTACCCGACGAGTACTTCGTGGTGTTGGTGGGTGACATGATCACGGAAGACGCGCTTCCCACTTACCAGACCATGATCAACAATCTCGACGGGGTGAAAGACGAGTGTGGAACGAGTCCAAGCCCGTGGGCCGTGTGGACCCGGGCCTGGACCGCCGAAGAAAACAGACACGGGGATTTACTCAGAACTTACTTGTACCTTTCCGGTCGTGTTGACATGGCCAAGGTCGAGAAAACCGTCCATTACCTCATTGGCGCTGGCATGGACCCTGGAACAGAGAACAACCCGTATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCGACGTTCGTGGCGCACGGGAACACGGCTCGGCTTGCGAAAGAGGGCGGTGATCCAGTGCTGGCGCGCATATGCGGGACCATCGCTGCGGACGAGAAGCGCCACGAAAACGCGTACTCGAGAATCGTGGAGAAGCTTCTAGAAGTGGACCCCACTGGAGCAATGGTGGCCATTGGGGACATGATGGAGAAGAAGATCACGATGCCGGCGCACCTTATGTACGATGGGGATGACCCCAAGCTATTCGAGCATTACTCCGCAGTGGCGCAGCGAATGGGCGTATACACAGCCAATGATTACGCGGATATCTTGGAGTTTCTGGTTGGACGGTGGAGATTGGAGAAGCTGGAAGGTTTAACGGGTGAAGGAAAGCGGGCGCAGGATTACGTGTGTGGGTTAGCGCCGAGGATAAGGAAGTTGCAAGAACGCGCTGATGAGCGAGCGCGTAAGATGAAGGCGCAGAGCATCAAGTTCAGCTGGATCTTTAATAAAGAACTGGTTTTGTGA 1161 0.5599 MQIRPCHSITTQTVFPWAYKNMCHRQHRHLLPPPNAAVSAAPFKARRTHSMPAEKMEIFRSLEGWASQWVLPLLKPVEQCWQPQNFVPDSTLPFEEFSEEVKVLRERTKELPDEYFVVLVGDMITEDALPTYQTMINNLDGVKDECGTSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMAKVEKTVHYLIGAGMDPGTENNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSRIVEKLLEVDPTGAMVAIGDMMEKKITMPAHLMYDGDDPKLFEHYSAVAQRMGVYTANDYADILEFLVGRWRLEKLEGLTGEGKRAQDYVCGLAPRIRKLQERADERARKMKAQSIKFSWIFNKELVL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01456 386 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 38 386 - -
Spst8g01456 386 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 42 384 IPR005067 GO:0006631|GO:0045300
Spst8g01456 386 Pfam Fatty acid desaturase 54 380 IPR005067 GO:0006631|GO:0045300
Spst8g01456 386 PIRSF Dlt9_acylACP_des 9 386 IPR005067 GO:0006631|GO:0045300
Spst8g01456 386 CDD Acyl_ACP_Desat 54 362 IPR005067 GO:0006631|GO:0045300
Spst8g01456 386 Gene3D Ribonucleotide Reductase, subunit A 39 386 IPR012348 GO:0016491
Spst8g01456 386 SUPERFAMILY Ferritin-like 43 385 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01456 Spst-Chr8 13706929 13708604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01456 33 384 Acyl Lipid Metabolism Gene Families AT1G43800 75.978 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01456 K03921 - gmx:100037478 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01456 8 13706929 13708604 Spst8g01456 8 13706929 13708604 ECH