Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01411 ATGAAGTCCATATGGTCTACGGATTTTCTGAAATCCTCTTCATCTGTTAGAATTATCTCCCTCTTACTCTTCTCCCTCACCCTTTTTCTCTTTCTCTTCACGCGTTTCTCCCCCACTTCTTATTCTTCCTTCGCATTCTCCTCCGCCGCCGTCGATGCACTCTCGAAGGGGCAACCATCATCACCTTCTCCTCCTCCTCTTCCTCCTCCTCCTCCTGCCCTGGCTCCGTCGCCGAAAATGTTCCTTGTGCCGCCGTTACCGCCTGTGGAGCGGATGGGGGTGTTGGACGGGAACGGCGTGATGACGGAGGATTTCAGAGTGGGGGAGTTGGATCTGGGTTTTGAGGAGGAATGGGTAAACGGCAGCATTTTAAGCGGGGCGAAGGAGAGTGATGGTGTGAGGAAGAAAGTGGAGAAGTACAAGGTGTGTGATGTGAGGATGGTGGATTACGTGCCGTGTTTAGATAACAAGAAAGCGATTGAGAAGTTGGAAGGGAGCTTGAGAGGGGAGAAGTACGAGCGGCATTGTCCCCAAGAAGGGATGGGCCTAAACTGTCGGGTGCCGCAGCCCAAAGGGTACCGGAGGCCCATCCTTTGGCCTAAAAGCAGAGACGAGGTTTGGTTCAGTAATGTACCCCATACACGTTTGGTTGAGGATAAAGGTGGCCAAAATTGGATATCAATAAAGAATGATAAATTTGTTTTTCCTGGTGGTGGAACTCAATTTATACATGGTGCAGATAAATACCTGGATCAGATTTCCGAGATGGTTCCTGACATTTCATTTGGTCACAACACCAGAGTTGCATTAGATGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGTAATGTGACCACTCTTTCAATAGCTCCAAAAGATGTTCATGAAAATCAGATTCAATTTGCGCTTGAGCGAGGCGTGCCTGCCATGGCAGCAGTGTTTGCTACACACCGTTTGTTGTTCCCTAGCCAGGCATTTGATCTGATTCATTGTTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCAACAGGCTCCTGAGGGCAGGTGGCTACTTTGTCTGGGCAGCACAGCCAGTTTACAAACATGAAGAGACCCTTCAAGAACAATGGAAAGAAATGGAGAACCTGACAACTCGTATTTGCTGGGAACTTGTACAAAAGGAAGGTTATATTGCTATATGGCAGAAACCTATGAATAATAGCTGCTATCTTAGTCGAGACATGGCTGTGCATCCTCCATTATGTGAGTCCAATGATGATCCAGATAATGTTTGGTATGTGAATCTTAAGGCTTGCATCACACAATTACCTAGTAATGGATTTGGAGCAAATGTTACAAAGTGGCCTTTGCGTCTTCATGAACCACCGAAAAGGCTTCAAAGCATCCAAGTGGATGCCACTATATCTAGAGATGAACTCTTGAGGGCTGACACAAAATATTGGTTTGAAATAATAGAAAGTTATGTCCGGGCTTTCCGTTGGCAGGAGTATAACCTGAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGGGTTGCTGCTGCATTGCATGATCTTCAGATTGATTGTTGGGTTATGAATGTTGTCCCTGTTAGTGGATTTAATACCTTGCCTGTTATATATGACCGTGGACTGATAGGCGTTGCGCATGACTGGTGTGAACCATTTGACACATACCCAAGAACGTATGATCTGCTGCATGCAGCAGGTCTTTTCTCTGTTGAAAAAAAGAGGCAAAAGTGTAACATCTCAACCATTATGCTTGAGATGGATCGGATGCTAAGACCAGGAGGGCGTGTATATATTCGTGACACCACACTTGTTATTGGTGAACTTCAAGAAATTGCAACTGCATTGGGATGGTCAAATTCCCTAAATGATGTAGGAGAGGGTCCCTATTCAAGTTGGAAGATATTAAGGTCTGAGAAACCATTCTGA 1971 0.4566 MKSIWSTDFLKSSSSVRIISLLLFSLTLFLFLFTRFSPTSYSSFAFSSAAVDALSKGQPSSPSPPPLPPPPPALAPSPKMFLVPPLPPVERMGVLDGNGVMTEDFRVGELDLGFEEEWVNGSILSGAKESDGVRKKVEKYKVCDVRMVDYVPCLDNKKAIEKLEGSLRGEKYERHCPQEGMGLNCRVPQPKGYRRPILWPKSRDEVWFSNVPHTRLVEDKGGQNWISIKNDKFVFPGGGTQFIHGADKYLDQISEMVPDISFGHNTRVALDVGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAMAAVFATHRLLFPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRAGGYFVWAAQPVYKHEETLQEQWKEMENLTTRICWELVQKEGYIAIWQKPMNNSCYLSRDMAVHPPLCESNDDPDNVWYVNLKACITQLPSNGFGANVTKWPLRLHEPPKRLQSIQVDATISRDELLRADTKYWFEIIESYVRAFRWQEYNLRNVMDMRAGFGGVAAALHDLQIDCWVMNVVPVSGFNTLPVIYDRGLIGVAHDWCEPFDTYPRTYDLLHAAGLFSVEKKRQKCNISTIMLEMDRMLRPGGRVYIRDTTLVIGELQEIATALGWSNSLNDVGEGPYSSWKILRSEKPF 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01411 656 FunFam probable methyltransferase PMT3 245 408 - -
Spst8g01411 656 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 149 654 IPR004159 GO:0008168
Spst8g01411 656 MobiDBLite consensus disorder prediction 59 74 - -
Spst8g01411 656 Gene3D Vaccinia Virus protein VP39 247 412 IPR029063 -
Spst8g01411 656 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 130 638 IPR004159 GO:0008168
Spst8g01411 656 MobiDBLite consensus disorder prediction 55 74 - -
Spst8g01411 656 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 488 622 IPR029063 -
Spst8g01411 656 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 395 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01411 Spst-Chr8 13281778 13286860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01411 - - pvu:PHAVU_001G067200g 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01411 8 13281778 13286860 Spst8g01411 8 13281778 13286860 ECH