Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01357 ATGAATGCCATCTTCACTGCTTCAGCTCTCTCTCTTCCATTTTTTCTTGGAGCTTCCAAATTTGACACCAGAAGGGATTTGAAATGTAGATTTAAAGTGTTTGCTGTATTTGGAGAAGAAGAGAAGAAAAATGCATGGGGTGCGCTGTTTGATGTTGAGGATCCGAGATCTAAGATTCCACAGAATAAAGGGAAGGTTTTGGATATCTATCAAGCCCTGGAAGTGGCAAGACATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTACTTACAATCATGCTCCTCCATGAAAAGGTAGTTGAAGTTCTCAATCCTCTAGCTCGTGAATATAAATCAATTGGGACCCTGAAAAAGGAGCTAGCTGAGTTGCAGGATGAATTAGCACACGCACACAGACAGGTTCATATATCTGAAGCAAGGGTTACCACTGCTTTAGATAAGCTTGCATACATGGAAGAATTGGTAAACGATAGGCTGTTGCTAGACAGAAGCACAGCTGAAATTTCCCAAACAACATCTTCTCCCAGTACATCTGCGAATTCTCTAGTTACAGAAAAGAGAAGGCAGCCACGGAAAAGCTTGAATGTATCAGGCCCGGTTCAGTCGTACCATCCCCACTTGAAGAATTTCTGGTACCCTGTTGCTTTCTCTAGCGACTTGAAGGATGATACCATGATCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTCAGAGGGAAAGATGGAAAGCCTGGATGTGTCCAGAATACTTGTGCACACAGAGCCTGTCCTCTGCACCTTGGTTCAGTAAATGAGGGTCGTATCCAATGCCCCTACCATGGCTGGGAATATACCACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTTCTAAATGTGAAAATAAAGTCAGTTCCATGCTTTGAAAAAGAGGGAATGATCTGGATTTGGCCTGGCAATGACCCACCAACAGCCACCCTTCCATCTTTACTACCTCCTTCTGGATTTGAAATCCATGCTGAGATTGTGATGGAACTTCCAATCGAACATGGTTTACTTTTGGACAATCTTTTAGATCTTGCACATGCCCCTTTTACTCACACGTCAACATTCGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAAATTTTTGACACCTGCGTCTGGCCTGCAAGGATACTGGGATCCTTATCCTATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCGGGGAAACTGGAAGGACAAAATACCAGGGAATGTTCAACGCACCTGCACCAACTTCATGTCTGTTTACCATCTTCAAAACAAAAGACAAGATTGCTATATAGAATGTCACTGGATTTCGCTCCTCTGCTTAAGCATGTACCTTTAATGCAATATCTATGGAAGCATTTCGCAGAACAGGTTTTAAATGAGGATCTACGGCTAGTGGTGGGGCAGCAAGAGCGAATGAACAATGGTGCAAATGTATGGAATTTTCCAGTATCCTATGACAAGCTTGGGGTGAGATACAGAATGTGGAGAGATGCATTGGAGCGAGGAGCTAAACAATTACCATTCACCTCAATAGATCAAATACAGAATTAA 1605 0.4287 MNAIFTASALSLPFFLGASKFDTRRDLKCRFKVFAVFGEEEKKNAWGALFDVEDPRSKIPQNKGKVLDIYQALEVARHDIQYLDWRARQDVLTIMLLHEKVVEVLNPLAREYKSIGTLKKELAELQDELAHAHRQVHISEARVTTALDKLAYMEELVNDRLLLDRSTAEISQTTSSPSTSANSLVTEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSSDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSVPCFEKEGMIWIWPGNDPPTATLPSLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHVPLMQYLWKHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVSYDKLGVRYRMWRDALERGAKQLPFTSIDQIQN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01357 534 Gene3D - 336 524 - -
Spst8g01357 534 Coils Coil 108 142 - -
Spst8g01357 534 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 254 276 IPR015881 GO:0005506|GO:0051537
Spst8g01357 534 MobiDBLite consensus disorder prediction 168 200 - -
Spst8g01357 534 SUPERFAMILY ISP domain 208 318 IPR036922 GO:0051537
Spst8g01357 534 Pfam Pheophorbide a oxygenase 400 495 IPR013626 GO:0010277
Spst8g01357 534 MobiDBLite consensus disorder prediction 168 186 - -
Spst8g01357 534 Gene3D - 207 329 IPR036922 GO:0051537
Spst8g01357 534 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 213 313 IPR017941 GO:0051537
Spst8g01357 534 SUPERFAMILY Bet v1-like 309 520 - -
Spst8g01357 534 CDD Rieske_RO_Alpha_Cao 196 324 - -
Spst8g01357 534 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 100 520 - -
Spst8g01357 534 Pfam Rieske [2Fe-2S] domain 213 294 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01357 Spst-Chr8 12717903 12722205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01357 K13600 - gmx:100805998 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01357 8 12717903 12722205 Spst8g01357 8 12717903 12722205 ECH