Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01353 ATGGCTCAAACCATGTTGCTCGTGTCCTGTGTCCCTGCTAGCTATTCTGTATATCAGAAGAGAAACTCTTTGCTTCAACTGCAGAATCGAGAATTAAGACCCAAATTCTCTTGTCTCTTTTTCAATCCACTACTTTCAGCTTCTCATGCATTTTCTTCTTCACCTCGTACATTCACAACTTTGGCCCTCTTCAAAACAAAGACCAAAGCCCCTCCCAACAACAAGTTGGTGAAGTCCAAGCCAAAACTGAAGGTTGAAGATGGCATTTTTGGCCCTGGAGGGTTCGGCTGTACTAAGCAGAACGAACTCTTTGTTGGTCGAGTTACCATGCTTGGTGTTGCAGCATCATTGTCGGGTGAAGAAGCAATTCATGAAACAGAGCCTCTTCTCCTTTTCTTCATCATTTTCAGTGTACTAGGAGCCATTGGAGTACTAAGTAACTGTGGTGAATTTCTTCATGACCCTGCCACACAACTGGATAAACCCCTCATTCCTCCAGGATGCCAGAAGAAAAGCAAAGTTGACAAGTTGTTGATGTGGTGGTGGACCTTCTCAGGCCTCACAAACATGATTATTGAGGGTTATTTTGTTTTCTCACCAGAGCTTTTCAAGGATAAGACTGGCTTCTTCCTAGCTGAAATTTGGAAGGAATACAGTAAAGCAGATTCAAGGTATGCAGGAAGGGATGCAGGGGTGGTTACTATTGAAGCAGTAACAGCTGTTTTGGAGGGTCCAGCTAGTATTTTAGCAGTATATTCAATAGCTGCTGGGAAATCATATAGCTACATACTTCAGTTTGCCATTTCTTTGGGCCAGTTGTATGGAATTGCTGTTTATTTCATAACAGCATTCTTAGAAGGTGATGACTTTTCTGCAAGTTCATTTTACTATTATGCATACTATATTGGAGCAAATGCCTCATGGATTATTCTACCGTCTATCGTTGTCATTCGCTGCTGGAGAAAGATTTGTGCAGCATTTAAGGTGATGGATGACTCCATGTTCAAACGGGACGGTCACTTTAACCGAACTTACTCCTACCAATCTTGCTCTTCTCAAAGAGATGTCCGTTACAGCTGTGGTACTTGTGGTTATGAATTGAATCTATCATCATCAAACCGGAATACCTCATCCATCGGATCAAAATATGGAAAGTCCATAAAGCGAGGTATCATATCATTCTTCCATATTGATCTCAGCAGATTTACGCAGGTTGATGAAATTCAGTGTGTGCCCCATTTTGATAAGCACTCATGGGGTTTGTTTCGCCGAAGAACCAACCTTCTTTGTCGCAAGTGTGGGAACCATATTGGAAATGCATACAATGGTTACACTACATCCTTCCCTCTTGTGTCAAACAGAGCAGAATCGTCTCCTAGCTCCAAAGTGGTCAATCATACAAAATATGACATTCGCATTCGTGCCTTGCAGCCTTCATCTTCTGAAGGATCTGGAACCCCTGTGTTTGCTTGA 1473 0.4229 MAQTMLLVSCVPASYSVYQKRNSLLQLQNRELRPKFSCLFFNPLLSASHAFSSSPRTFTTLALFKTKTKAPPNNKLVKSKPKLKVEDGIFGPGGFGCTKQNELFVGRVTMLGVAASLSGEEAIHETEPLLLFFIIFSVLGAIGVLSNCGEFLHDPATQLDKPLIPPGCQKKSKVDKLLMWWWTFSGLTNMIIEGYFVFSPELFKDKTGFFLAEIWKEYSKADSRYAGRDAGVVTIEAVTAVLEGPASILAVYSIAAGKSYSYILQFAISLGQLYGIAVYFITAFLEGDDFSASSFYYYAYYIGANASWIILPSIVVIRCWRKICAAFKVMDDSMFKRDGHFNRTYSYQSCSSQRDVRYSCGTCGYELNLSSSNRNTSSIGSKYGKSIKRGIISFFHIDLSRFTQVDEIQCVPHFDKHSWGLFRRRTNLLCRKCGNHIGNAYNGYTTSFPLVSNRAESSPSSKVVNHTKYDIRIRALQPSSSEGSGTPVFA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01353 490 ProSiteProfiles EXPERA domain profile. 174 316 IPR033118 -
Spst8g01353 490 Pfam EXPERA (EXPanded EBP superfamily) 210 319 - -
Spst8g01353 490 PANTHER STEROL ISOMERASE 146 330 IPR007905 GO:0016020|GO:0016125|GO:0047750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01353 Spst-Chr8 12693648 12699323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01353 K01824 - gmx:100777814 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01353 8 12693648 12699323 Spst8g01353 8 12693648 12699323 ECH