Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01352 ATGATGGACGGGTTCAACTTCTCACGGGTCAAAACTACGATTCAATTTGGCTCCATTCAATGTAGTGATTTAGGGTTTGAGGTCTTTAGGGTCATGGTTGTTTGGGTTCAAGCTCGCGATGTTAATGGTGAAGGCCGAAATCAATCTCTTAACAATAAGAACGAGTCTCCATTGCACTTTGCCGACTCAATCTCCTCCTCCTCCTCCATGGAATTTCCTAACTCTGCCAAGTTTCAAATCCAACATGCGCCACTTTTTGTGATTTTATCCATTGCTGCTACCTTGGCACCAAACCCAGTATTTGCAACCAAAGAATGTGCTTTTCCTGCAATCTTCAACTTTGGTGACTCAAACTCAGATACAGGTGGCTTAGCTGCTTCCCTTATAGCACCAACACCACCATATGGAGACACCTATTTTCACAGACCTGCAGGAAGATTCTCTGATGGTCGTCTCATAATTGATTTCATAGCAAAGAGTTTTGGACTCCCTTATATAAGTGCATATCTTGATTCTCTGGGCACCAACTTCTCACATGGTGCAAACTTTGCAACATCAGCATCAACAATAAGACTTCCACAGAGTATTATACCTCAGGGTGGATTCAGTCCCTTCTATCTTGGTGTTCAGTATACTCAATTCAGAGAGTTCAAGCGCAGAACACAACTCATTAGAAATCAAGGTGGCATACTTGCAAGCCTGATGCCCAAACAAGATTATTTTCATAAAGCTTTGTACACATTTGATATCGGTCAAAATGATCTTGGTGCTGGCTTTTTTGGAAATTTAACTGTTCAACAAGTCAATGCTACTGTACCTGATATAGTCAATGCTTTCTCAGAAAATGTTAAGGTCATATATGATCTGGGAGCAAGATCATTTTGGATACACAACACAGGACCCATTGGATGTCTTCCTTACATTTTGGCCAATTTCCTCTCAGCTGAAAGGGATCCGTATGGTTGTGCAAAGCTATATAATGAAGTAGCTCAGTATTTCAACCACAAATTGAAGGAAGCTGTGGTTCAACTTCGCAGAAATCTTACTCTGGCTGCAATCACATATGTTGATATATATTCTGTAAAGTACTCTCTTTTCAGCCACCCAAAGAAATATGGATTTGAGCTACCACTAGTTGCTTGTTGTGGCTATGGAGGGGAGTACAACTACAGTGGTAGTGTTGGATGTGGAGAAAGCATAGACGTTAATGGAATAGAAATTTTTGTGGGTTCATGTGAAAGGCAATCAGTTAGAGTGAACTGGGATGGGATCCATTACACAGAAGCAGCAAACAAATTCATCTCTGATCAAATTTCTACCGGAGCTTTCTCAGACCCACCCCTTCCTTTGAATATGGCATGTCACAAAAATTGTATAAAAAATTATTGA 1389 0.406 MMDGFNFSRVKTTIQFGSIQCSDLGFEVFRVMVVWVQARDVNGEGRNQSLNNKNESPLHFADSISSSSSMEFPNSAKFQIQHAPLFVILSIAATLAPNPVFATKECAFPAIFNFGDSNSDTGGLAASLIAPTPPYGDTYFHRPAGRFSDGRLIIDFIAKSFGLPYISAYLDSLGTNFSHGANFATSASTIRLPQSIIPQGGFSPFYLGVQYTQFREFKRRTQLIRNQGGILASLMPKQDYFHKALYTFDIGQNDLGAGFFGNLTVQQVNATVPDIVNAFSENVKVIYDLGARSFWIHNTGPIGCLPYILANFLSAERDPYGCAKLYNEVAQYFNHKLKEAVVQLRRNLTLAAITYVDIYSVKYSLFSHPKKYGFELPLVACCGYGGEYNYSGSVGCGESIDVNGIEIFVGSCERQSVRVNWDGIHYTEAANKFISDQISTGAFSDPPLPLNMACHKNCIKNY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01352 462 CDD SGNH_plant_lipase_like 109 441 IPR035669 -
Spst8g01352 462 Gene3D SGNH hydrolase 100 441 IPR036514 -
Spst8g01352 462 Pfam GDSL-like Lipase/Acylhydrolase 111 438 IPR001087 GO:0016788
Spst8g01352 462 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 90 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01352 Spst-Chr8 12686223 12690122 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01352 109 452 Acyl Lipid Metabolism Gene Families AT4G10950 27.654 1.17e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01352 - - gmx:100779094 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01352 8 12686223 12690122 Spst8g01352 8 12686223 12690122 ECH