Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01350 ATGGAATTTGCTATCCTTACCAAGCTATTTCACAACCCTCTTGTGTCTCTTGTTCTTTGGTCCATTGCTGCAACATCACTGAACCCTGCAATGGCCACAAAACGTTGTGATTTCCCTGCCATCTTCAACTTTGGTGCCTCAAACGCTGACACTGGTGGCTTGGCTGCTTCCTTTCCTTTTGCTGGACCAAAACCACCCAATGGAGAAACCTTTTTCCATAGACCTGCTGGAAGGTTCTGTGATGGCCGACTCATCATTGACTTCTTGGCAAATAGTTTTGGACACAATTATCTCAGTCCATATCTTGATTCAATGGGGTCCAACTTCTCACATGGAGCAAATTTTGCATCAGCTGGAGCTACAATCAGACTCCAACAAGGTTTTGGGCAGTCTAGATTCAGTCCTTTCAACTTTGGATATCAGTACTCGCAATTCGAACGTTTTAAACCTACTACACAGTTCATTAGAGACCAAGGTGGGGTGTTTGCAACCCTTATGCCCAGAGAAGAATACTTTGATGAAGCTCTATACACATTTGATATAGGCCAAAATGATCTAACAGCTGGCATTTTTGGTAACATGACCCTACAACAAGTAAATGTTTCTACACCTGATATAATCTCGACTTTCACATCAAACATAAAGAACATATACAATCTGGGGGCAAGATCATTTTGGATTCACAACACTGGACCCATTGGTTGTCTCCCTACGATTTTGGCCAATTTTGCATCTGCTGAACTGGATGAGTATGGTTGTGCAAAAGCATATAATGAAGTGGCTCAGTCTTTCAACCAAAATTTGAAGGAAGCCTTGGCTCAACTCCGTAAGGAACTTCCTTTGGCTGCAATCACATATGTAGACATCTACACTCCTAAGTACTCTCTTTTCAGCAATCCAAAGAAATATGGCTTTGAGCTTCCACATGTTGCTTGTTGTGGCTATGGAGGGAAGTACAACTTCAGCAATAGCGTTGGATGTGGAGGAACCATTAAGGTCAATGGCAAAGATATTTTTGTGGGTTCATGTGAACGACCATCTGCTAGAGTGATATGGGATGGGACCCACTACACTGAAGCAGCTAACAAGGTTGTCTTCGATCAAATCTCTTCTGGGGCTTTCACAGATCCACCCATTCCATTGAATAGGGCATGTGATAGATATTGA 1167 0.4259 MEFAILTKLFHNPLVSLVLWSIAATSLNPAMATKRCDFPAIFNFGASNADTGGLAASFPFAGPKPPNGETFFHRPAGRFCDGRLIIDFLANSFGHNYLSPYLDSMGSNFSHGANFASAGATIRLQQGFGQSRFSPFNFGYQYSQFERFKPTTQFIRDQGGVFATLMPREEYFDEALYTFDIGQNDLTAGIFGNMTLQQVNVSTPDIISTFTSNIKNIYNLGARSFWIHNTGPIGCLPTILANFASAELDEYGCAKAYNEVAQSFNQNLKEALAQLRKELPLAAITYVDIYTPKYSLFSNPKKYGFELPHVACCGYGGKYNFSNSVGCGGTIKVNGKDIFVGSCERPSARVIWDGTHYTEAANKVVFDQISSGAFTDPPIPLNRACDRY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01350 388 Gene3D SGNH hydrolase 28 373 IPR036514 -
Spst8g01350 388 CDD SGNH_plant_lipase_like 39 372 IPR035669 -
Spst8g01350 388 Pfam GDSL-like Lipase/Acylhydrolase 41 369 IPR001087 GO:0016788
Spst8g01350 388 Coils Coil 254 278 - -
Spst8g01350 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 24 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01350 Spst-Chr8 12668360 12670401 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01350 39 382 Acyl Lipid Metabolism Gene Families AT4G10950 28.090 1.21e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01350 - - gmx:100818460 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01350 8 12668360 12670401 Spst8g01350 8 12668360 12670401 ECH