Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01347 ATGGTTTTTCTTTCCTTCCATCTTCAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATCTTACTCATTGAATGAGACAGAGGTTACAACAGTGATATGTGGGCGAAAAGAATTGAAAACACTAGTAAATATAAGTGGACAACTTGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGATGCCTCTTCTATTGCATATAACTGGAGAATCACTTCATTTGCTGAGGTTGTGAGACTTGGCAGAGAAAATCCTGTTGAAGCTGATTTACCCCTTTCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACAGGATTACCCAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACACTCTCGGCTGTGATGACCATTGTTCCTGATATTGGGACAAAGGATATATATCTTGCATACTTACCGATGGCTCATATCTTAGAATTAGCAGCTGAGAATTTGATGGCAGCTGTTGGGGTTCCTATAGGATATGGATCTCCTCTGACCCTTACTGACACATCAAACAAGATTAAAAAAGGGACAAAGGGGGATGCTACTGCACTGAGGCCAACATTAATGGCAGCTGTACCGGCAATTCTTGATCGTGTCCGTGATGGAGTGTTCAAGAAGGTAAATGCAACAGGAGGATTTCCGAAGATGTTGTTTCATTTTGCCTATGCGCGGAGGTTACAAGCAGTTAATGGTAGTTGGCTTGGAGCTTGGGGCCTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAGAAAGGTCCGGGCTATTCTGGGTGGCCGTATCCGTTTTATACTATCCGGTGGTGCTCCCCTTTCTGGTGATACCCAGCAGTTCATCAACATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACCGAGACTTGTGCGGGTGGGACATTCTCTGATGTTGATGATCCTTCTGTTGGTCGTGTTGGACCACCTCTTCCATGCTCATTTATTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAATAAATGACTCTCCAATGCCCCGAGGAGAAATTGTAATTGGTGGTCCAAATGTCACTCTCGGGTATTTCAAAAATGAAGAAAAAACAAAAGAATCGTACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGATTTCATTCAGATGGATGTCTTGAAATCATTGACCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCATTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGCCCTTTCGTGGACAATATTATGGTTCATGCTGATCCTTTCCACAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTTCACATTGGAGGAATGGGCTTCAGAACAAGGTATTTCATATATCAATTTTTCAGATCTGTGTGCAAAAGAAGTAACTGTGAAGGAGGTGCATACATCACTTGTAAAGGAGGGAAAGAAGGCTCATCTGGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCCGACCCATGGACCCCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAACTCAAGAGAGAGGCCATAAAAAAGACTTTTGATGAAGAACTTTCAAAGTTGTATGCTTCATAG 1668 0.4251 MVFLSFHLQGCFRRNVTVVTIYASLGEEALSYSLNETEVTTVICGRKELKTLVNISGQLDSVKRVICMDDDIPSDASSIAYNWRITSFAEVVRLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDIYLAYLPMAHILELAAENLMAAVGVPIGYGSPLTLTDTSNKIKKGTKGDATALRPTLMAAVPAILDRVRDGVFKKVNATGGFPKMLFHFAYARRLQAVNGSWLGAWGLEKALWDFLVFRKVRAILGGRIRFILSGGAPLSGDTQQFINICLGAPIGQGYGLTETCAGGTFSDVDDPSVGRVGPPLPCSFIKLIDWPEGGYLINDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHSDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYCVALVVGSQFTLEEWASEQGISYINFSDLCAKEVTVKEVHTSLVKEGKKAHLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREAIKKTFDEELSKLYAS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01347 555 SUPERFAMILY Acetyl-CoA synthetase-like 8 553 - -
Spst8g01347 555 Gene3D - 4 414 IPR042099 -
Spst8g01347 555 Pfam AMP-binding enzyme 8 422 IPR000873 -
Spst8g01347 555 ProSitePatterns Putative AMP-binding domain signature. 113 124 IPR020845 -
Spst8g01347 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01347 Spst-Chr8 12633412 12641575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01347 8 554 Acyl Lipid Metabolism Gene Families AT1G77590 78.976 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01347 K01897 - gmx:100803677 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01347 8 12633412 12641575 Spst8g01347 8 12633412 12641575 ECH