Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01335 ATGGTAGTGTGGGTATTTGGGTATGGTTCCTTGATCTGGAAAGCTGGGTTTCAATATGATGAACGTGTTGTTGGTTTCATCAAAGGCTATCGACGTGTCTTCTACCAAGGCTCTACTGACCATAGAGGGACCCCTGAGTTTCCTGGAAGAACAGTGACCCTGGAGCCTGCTGAAGGAGAAATATGTTGGGGAGCTGCTTACATGATCTCGAAGAAAGAAGATGCAGATTCTGCATTAACGTATCTGGAAGTAAGAGAGAAGCAATACGACAAAAAGGAATACCTTGACTTTTATACTGACCTTAACGCTACATCTCCAGCTGTTTCTGGAGTGATGGTATACATAGCAACTCCAGAAAAGAAATCTAATGTAAATTATTTGGGCCCTGCATCTGATGAAGAGATTGCGAGGCAAATAATTAAGGCTGAAGGTCCTGCAGGACCTAACAGAGATTATCTTTTCAACCTTGAAAAGGCCCTTCTTCAAATAGGATGCAAAGACAAACATGTTATTGATCTTGCAAATGAAGTCAGGCGTATTCTTGAAGAGGAACACTGA 558 0.4211 MVVWVFGYGSLIWKAGFQYDERVVGFIKGYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGEICWGAAYMISKKEDADSALTYLEVREKQYDKKEYLDFYTDLNATSPAVSGVMVYIATPEKKSNVNYLGPASDEEIARQIIKAEGPAGPNRDYLFNLEKALLQIGCKDKHVIDLANEVRRILEEEH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01335 185 Gene3D - 2 183 - -
Spst8g01335 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 122 IPR036568 -
Spst8g01335 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 184 IPR006840 GO:0006751|GO:0061928
Spst8g01335 185 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Spst8g01335 185 CDD GGCT_like 5 116 IPR013024 -
Spst8g01335 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0006751|GO:0061928
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01335 Spst-Chr8 12512591 12519916 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01335 K22596 - gmx:100305985 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01335 8 12512591 12519916 Spst8g01335 8 12512591 12519916 ECH