Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01325 ATGGCTCGGAGCACAATGGACCTTGGGACTGGAGTGTCTCTGTTGGTGTTGTTATGCTTTACCACGCACTTTTGGGTGCTCCCTCTTGCAGAGGCAGTGTGGTTTACACTCCCCACTACAGGGACTAAGTGCTTGTCCGAGGAAATCCAGAAAAACGTGGTCGTTTTAGGCGATTATTATGTGGTTACTGAAGAGGGTCCCCAGCTCAACACAGTTTCTGTCAAGGTAACATCTCCTTATGGGAATAGCCTTTACCACAATGAAAATGCCACACAAGGTCAATTTGCATTTACAACAGAGGAGAGTGGGAACTACGTGGCGTGTTTTTGGTTAGATAGTAAACATCAAGCAGAGGCAACTATCAGCCTTGATTGGAAAACTGGAATTGCTGCCAAAGATTGGGAGTCTGTTGCAAAGAAAGAAAAGATTGAGGGTGTTGAATTCGAGCTTAAGAAACTTGAAATTTCAGTGCAAGCCATCCACAATTACCTAGTTTATCTGAAGGATAAGGAAGCAGGGATGAGAGCAGTTAGTGAAAAAACAAATGGCAGAGTTGCTTGGTATAGCATCATGTCTATTAGTATCTGCATTTTGGTTTCTTTGTTACAAGTTTGGTATCTGAAGCGCTATTTTCTGAAGAAGAAACTCATATAG 654 0.4266 MARSTMDLGTGVSLLVLLCFTTHFWVLPLAEAVWFTLPTTGTKCLSEEIQKNVVVLGDYYVVTEEGPQLNTVSVKVTSPYGNSLYHNENATQGQFAFTTEESGNYVACFWLDSKHQAEATISLDWKTGIAAKDWESVAKKEKIEGVEFELKKLEISVQAIHNYLVYLKDKEAGMRAVSEKTNGRVAWYSIMSISICILVSLLQVWYLKRYFLKKKLI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01325 217 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 213 IPR015720 -
Spst8g01325 217 ProSiteProfiles GOLD domain profile. 42 152 IPR009038 -
Spst8g01325 217 SMART EMP24_GP25L_2 32 212 IPR009038 -
Spst8g01325 217 Pfam emp24/gp25L/p24 family/GOLD 32 211 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01325 Spst-Chr8 12385776 12390076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01325 K20352 - gmx:100799948 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01325 8 12385776 12390076 Spst8g01325 8 12385776 12390076 ECH