Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01309 ATGGCATTCTATCCTAAAACCATCTTTCCAATCACTTTGCTTCTTGCAATCTTTTTATCAGGGCAAAGACCATGCGAGAGCGCAAGAGTTTTCACCATCGTCAACTACTGCAAGGAGACCCTGTGGCCGGCGGTGACGCCCGGAGAGAAATTCAACGGCGGCGGTTTCGTTCTCAAACCGGGTCAATCCGCGGTCTTTACCGCCCCGGTGAGTTGGAGCGGCCGCATTTGGGCACGAACCGGTTGCAAATTCGACCAAAACGGAAACGGGCAATGCCAAACCGGTTCATGCGGCACAACGCTGAAATGTTCGGCCTCGGGAAAAACGCCGGCGTCACTCGCGGAATTCACACTCGCGCAACCCGACTTCTACGACGTTAGCCTCGTGGACGGCTTCAACGTCCCCATCGCCGTCAGGCCCATTAACGGAAAGGGAAACTGCTCCTCCGCGGGATGCAACTCCGACCTGAGAGCGACTTGCCCCAACGAACTCGCCCTTAAGGCTAACGGCAAGACCGTTGGGTGCCGTAGCGCGTGTGACGTGTTCAACACCGACGAGTATTGCTGCAAAGGAAATTATGGGAACCCCTCCACTTGCAAACCTACCTTTTATTCCAAGAAGTTTAAGGAAGCGTGTCCAACTTCTTATAGTTATGCCTACGATGATCCAACTAGCATCTTCACATGTTCTGCAACTGATTACATCGTAGCCTTCTGCTCCTCCAGGAAACGACAGGTATGCACATACCATGATAACAAGCTTCACTGTAGTGGATCACAAGGATTGAAATCGCTGACTGGAAGGTGGTGCATCGTCATGATAACTCTGCTTTCCGTTCTTTGTTTATGGAATGGGTTCTAG 861 0.518 MAFYPKTIFPITLLLAIFLSGQRPCESARVFTIVNYCKETLWPAVTPGEKFNGGGFVLKPGQSAVFTAPVSWSGRIWARTGCKFDQNGNGQCQTGSCGTTLKCSASGKTPASLAEFTLAQPDFYDVSLVDGFNVPIAVRPINGKGNCSSAGCNSDLRATCPNELALKANGKTVGCRSACDVFNTDEYCCKGNYGNPSTCKPTFYSKKFKEACPTSYSYAYDDPTSIFTCSATDYIVAFCSSRKRQVCTYHDNKLHCSGSQGLKSLTGRWCIVMITLLSVLCLWNGF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01309 286 PIRSF PR5 3 279 IPR001938 -
Spst8g01309 286 SMART tha2 31 240 IPR001938 -
Spst8g01309 286 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
Spst8g01309 286 FunFam Thaumatin-like protein 1a 29 240 - -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Spst8g01309 286 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Spst8g01309 286 Pfam Thaumatin family 35 239 IPR001938 -
Spst8g01309 286 Gene3D Thaumatin 30 239 IPR037176 -
Spst8g01309 286 PANTHER OS03G0233200 PROTEIN 17 239 IPR001938 -
Spst8g01309 286 CDD TLP-PA 30 239 - -
Spst8g01309 286 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01309 Spst-Chr8 12253492 12255028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01309 13 239 Receptor kinase-like Gene Family AT5G38280 42.739 3.56e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01309 - - gmx:100813659 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01309 8 12253492 12255028 Spst8g01309 8 12253492 12255028 ECH