Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01308 ATGAAATCCAAAGCCGGCGGAAACGGCCTCACGAGCGAGGCCGGCGGCGGAGGAAGCAGCAGTTCTCCTAGTCCACCGCCGTCACCGCGGCGGAACTCTGGCGTTCCGAGGTGCCGGAGGCGGCTTCGACCGGCGAAGGACTTGTTGGAGAGTCGGCGGCTAGTCGCCGGCATCATGGCGCGGCGGAGCCTCCGGTACTTCTTCCTGCTGCCGGTGGTGTACATCTCCGGGTTGTTGATGTGCGTGGGGCCCTTCTCCGCCCTCATTGGCCACTCTCCTCTTCCAGGTTCCCGGTACCGCAGTCACGAGATCTTCCACAACCTCTGGCACCATATCGAAACCGATAATTCCTCTGTCATTGAGTTGGCTTCTGTGTGGAAGTACAAAAGGAAATTGAGGGAGCAAAAGCCTTGTCCGAATTTGACGGCTTTGCATCGCGAACATTTTGTGTCGCCTGGACGGAATGGTTTTTTGATTGTGGAGGCCAATGGGGGTCTTAACCAGCAACGCTCTGCGATTTGTAATGCTGTGGCTGTGGCTGGGCTCCTGAATGCAATACTAGTTATACCTCAGTTTGAGTTTCACAATGTGTGGAAAGATCCAAGTGAATTTGGGGATATATATGATGATGGTCATTTTATATCCACACTTGATGGTTATGTGAAGGTGGTCAAAGAACTGCCTGAGGCACTAATGGAGCGGCATAGTTACAATATGAGTAATATCACTAACATAAGAGTTCAAGCGTGGGCTCCTGTCAGTTATTACCTTGGAGTTGTTTCTCCTATCTTGCAAAAGGAAGGGGTAATTCGAATTGCTCCATTTGCCAATCGTTTGGCAATGAGTGTTCCTCCACATATTCAATTTCTAAGATGTCTCACTAATTATAAAGCATTGAGATTTTCTTCTTCAATATCTGCTCTAGCAAAGAAATTAGTTTACCGAATGATTGAGAAGAGCTCAAGGACAGACGGAAAATACATTGCTGTGCATCTTCGTTTTGAGGAGGATATGGTGGCATTCTCCTGTTGCGTATATGATGGAGGAGAGGCAGAAAAATTGGAAATGGATTCTGCTCGAGAAAAAGGGTGGAGGGGCAAATTTAAAAGAAAGGACCGTAAAATTTTACCTGACCTTAATCGGGTTGAAGGAAAATGCCCGCTAACCCCACTAGAGGTTGGTATGATGCTTCGTGGCATGGGATTTGATAACAATACTGCAATATACTTAGCTTCTGGGAAAATATATCATGCAGAGAGATATTTGGCACCTTTGATGAAGATGTTTCCGTCTCTTTATACAAAGGAATCTCTTGCAACATCAGATGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTAGCTGCTCTGGACTACACTGTATGCTTGTCTAGTGAGGTTTTTGTAACAACTCAGGGTGGTAACTTCCCTCATTTTTTGATGGGACATAGAAGATTCCTCTATGATGGCCATGCTAAGACAATTATCCCAGATAAGCGCAAGCTAGTTGTCCTTTTGGATGACTTAAGTATTAGTTGGAGAGCTTTCAAGGATCAGATGGAAGACATGCTCAGTGAAAGTGACCGCAAAGGAATCATGGTACCTAGAGTTAGAAAAATAAACAGAAAAACTTCTGTCTACACGTACCCCTTACCAGAATGCAGGTGCCTACAGCAGTCTCTTGCCAATCAAATTGACCACAATCTTGACGTTCTGTATAATTACAACGGAACAAAAGCTTAA 1743 0.4578 MKSKAGGNGLTSEAGGGGSSSSPSPPPSPRRNSGVPRCRRRLRPAKDLLESRRLVAGIMARRSLRYFFLLPVVYISGLLMCVGPFSALIGHSPLPGSRYRSHEIFHNLWHHIETDNSSVIELASVWKYKRKLREQKPCPNLTALHREHFVSPGRNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQFEFHNVWKDPSEFGDIYDDGHFISTLDGYVKVVKELPEALMERHSYNMSNITNIRVQAWAPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYKALRFSSSISALAKKLVYRMIEKSSRTDGKYIAVHLRFEEDMVAFSCCVYDGGEAEKLEMDSAREKGWRGKFKRKDRKILPDLNRVEGKCPLTPLEVGMMLRGMGFDNNTAIYLASGKIYHAERYLAPLMKMFPSLYTKESLATSDELAPFMGYSSQLAALDYTVCLSSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLLDDLSISWRAFKDQMEDMLSESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLANQIDHNLDVLYNYNGTKA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01308 580 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 59 560 IPR024709 -
Spst8g01308 580 MobiDBLite consensus disorder prediction 1 39 - -
Spst8g01308 580 CDD O-FucT_plant 157 494 IPR024709 -
Spst8g01308 580 PIRSF UCP009360 31 560 IPR024709 -
Spst8g01308 580 Pfam GDP-fucose protein O-fucosyltransferase 157 486 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01308 Spst-Chr8 12212616 12218959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01308 117 556 Miscellaneous Gene Families AT1G22460 36.980 3.56e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01308 - - gmx:100812590 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01308 8 12212616 12218959 Spst8g01308 8 12212616 12218959 ECH