Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01305 ATGCATCCCTTCTGCTGCGTCTCCGCCATTTCCGACCACTCCTCACCGGTCACCCACGCCATGCCCCCTATCCCTGCCGCGGCCGCCACATCGAGATCCGACTGCGCTCCCCGACAGGGTCAAGCCTCCCTCAGCATCACTAATGGCAGCGAAGGCTGCCGTGCATACACTCAGTCCGCGCCAGCGGCGGTGGTGGACGTGAGGATCAAAGACCTCGTTGGGAACGGAATCTCCGGAATTCTACACAAATGGGTGAACTATGGCAAAGGATGGAGATCGCGCTGGTTCGTGCTCCAAGACGGCGTCCTCTCGTACTACAAGATTCACGGATGCGACAAGATTGTTGTAAACTCCGAAACCGAGAAGGGATCGAAGGTTATTGGCGAGGAATCCGCTCGCATGATCTCTCGCAACCGCAATTCGAATCACGTCGGTTATCGACGAAAGCCCGTAGGCGAAATTCATCTCAAGGTTTCGACTATTCGCGAGAGCCGGTCAGATGACAAGCGGTTTTCTGTTTTCACTGGGACTAAGAGACTCCATTTGAGGGCCGAAACTCGAGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCAGTGAAAGATATGTTTCCGCGGATATCCAACAGCGAGTTGATGGCACCGGTGGACAATGTGGCAGTTTCGACTGAGAAACTGAGACATCGTCTTATGGAGGAAGGAGTAAGCGAGGAAGCTATTAAGGACAGTGAACAAATAATGAGAAATGAGTATGCCGTGCTGCAAAACCAGCTTCTGCTGCTTAAACAGAAGCAGGTGGTTCTAATCGACACTTTGCGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAACACTGTGGTTGACGAAAGCCAAAGACAATTGAATGATCAAGAGGCTTCCTCTAGATTAAGGCAGGAGAAATCTAGTGCAGCAAGTGCAAGTGAGTCTGAGGATGAAATTGAGAGAAATGATGCAGCCGAGGAGGAAACAGATGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCATCGTCCAATTCTTTTAAAAGTAATGCATCTGATATTAGGGCCTCGTCTTTCTCTTCAGATGATGAAGGACTCTATGCTGTTGAATCAGAGGAGGATGTAGACCCTTCGATTAGATCCGTTGGAGCAAGCTATCCTTATGTTAAGCGGCGTAAGAAATTACCTGATCCTGTTGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCTTTGCAAAAATGCTGTGAAGAAATGGAGTACTCATATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGCAATACCCTCATGAGAATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAGAATCTGTAAGCCATTTAACCCTTTACTAGGGGAAACATATGAGGCTGACTTTCCGGATAAAGGCTTTCGATTTTTCTCGGAGAAGGTCAGTCATCACCCAATGGTAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAGAGTAAATTTTGGGGTCGGTCAATTCAGCTTGATCCTGTTGGTATTTTGACTTTGGAATTTGATGATGGTGAAATATTCCAGTGGAGTAAGGTTACAACATCAATATACAATCTCATATTGGGAAAGCTGTATTGTGATCATTATGGTACGATGCGGATACAGGGAAATCAAGATTACTCATGTAAACTGAAATTCAAGGAACAGTCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATTGTTCAGGACAGGAATGGGAAAATATTGTCTACATTGCTTGGAAAATGGGATGACAGCATGTATTATATAAATGGAGACTATAGTGGGAAGGGAAAGGGTTACGAATCAATGTCAGATGCCCATCTAATATGGAAGCGGAGCAAGCCTCCCAAGTTCCCCACTAGATATAACTTCACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAACGGATAAGCTGCCACCTACCGATTCAAGGTTAAGACCTGATCAAAGGCATTTGGAAAATGGCGAGTATGAGATGGCAAATTCAGAAAAGTTGCGACTAGAACAGCGTCAACGTCAGGCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTGCTAAGGATAAAGCCAGCGGTACCTACCGCTACATAGGAGGGTATTGGGAGGCCCGAAAACATGGAAATTGGAACTCATGTCCTGACATTTTTGGTCAAATTTCTTCTGATCATCTTCCAGACGAAGGTCAATAA 2367 0.4584 MHPFCCVSAISDHSSPVTHAMPPIPAAAATSRSDCAPRQGQASLSITNGSEGCRAYTQSAPAAVVDVRIKDLVGNGISGILHKWVNYGKGWRSRWFVLQDGVLSYYKIHGCDKIVVNSETEKGSKVIGEESARMISRNRNSNHVGYRRKPVGEIHLKVSTIRESRSDDKRFSVFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRISNSELMAPVDNVAVSTEKLRHRLMEEGVSEEAIKDSEQIMRNEYAVLQNQLLLLKQKQVVLIDTLRQLETEKVDLENTVVDESQRQLNDQEASSRLRQEKSSAASASESEDEIERNDAAEEETDDEDTAFFDTRDFLSSSNSFKSNASDIRASSFSSDDEGLYAVESEEDVDPSIRSVGASYPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNTLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMVVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQDYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKILSTLLGKWDDSMYYINGDYSGKGKGYESMSDAHLIWKRSKPPKFPTRYNFTRFAITLNELTPGLTDKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQRQRQARKMQESGWEPRWFAKDKASGTYRYIGGYWEARKHGNWNSCPDIFGQISSDHLPDEGQ 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01305 788 Gene3D - 75 204 IPR011993 -
Spst8g01305 788 SUPERFAMILY Oxysterol-binding protein-like 404 780 IPR037239 -
Spst8g01305 788 SMART PH_update 75 204 IPR001849 -
Spst8g01305 788 Pfam Oxysterol-binding protein 409 764 IPR000648 GO:0008289
Spst8g01305 788 CDD PH_ORP_plant 77 209 - -
Spst8g01305 788 Gene3D - 706 769 - -
Spst8g01305 788 FunFam Oxysterol-binding protein-related protein 2A 706 777 - -
Spst8g01305 788 MobiDBLite consensus disorder prediction 291 338 - -
Spst8g01305 788 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 76 763 IPR000648 GO:0008289
Spst8g01305 788 SUPERFAMILY PH domain-like 77 206 - -
Spst8g01305 788 MobiDBLite consensus disorder prediction 320 336 - -
Spst8g01305 788 Gene3D - 495 669 - -
Spst8g01305 788 Coils Coil 272 292 - -
Spst8g01305 788 Pfam Pleckstrin homology domain 82 198 - -
Spst8g01305 788 FunFam oxysterol-binding protein-related protein 1D isoform X1 495 667 - -
Spst8g01305 788 Coils Coil 714 734 - -
Spst8g01305 788 ProSiteProfiles PH domain profile. 74 202 IPR001849 -
Spst8g01305 788 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01305 Spst-Chr8 12174183 12181555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01305 K20456 - gmx:100817212 1410.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01305 8 12174183 12181555 Spst8g01305 8 12174183 12181555 ECH