Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01279 ATGAGTAACTGTGCCATATGCGAGAATTCGAATCAAGCCTCCATTTGTTCCATCTGTGTTAACTACAGGTTGAATGAGTATAATACTTCCTTGAAGTCACTGAAAGACCGTCGAGATTCGTTGTACTCAAAATTGAGCGATGTTCTTGTCCGCAAGGGAAAGGGAGATGACCAAGCAAATTGGAGAGTGCTTCAAAATGAAAAACTTGCAAGGTTGAAGGAGAAGCTTCGTCACAGTAAGGAACAAGTTACTCAAGGAAGAGCTAAGATAGAGACTGTGTCTGCTGATCTGAAACTTAAATATGGGTTACTTGAATCTTCCCTTTCAACGCTGGAAAAGAATCGATTGGAACAACTGGAGAAGTTCTACCCCAATCTTATATGCACCCAGAGCCTAGGGCATGTGGCGATTACCTCTGAGCGCCTTCACAAGCAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTCCCACAAAAGCGGGTGATCATAGAGGGAGAGATAAAGGATGGTTGTAGTGGTCAATATGATCAAATTTGCAATTCGCGATTACCCAGAGCCCTTGATCCCCACTCCGTTCCATCAGAAGAGCTTTCTGCTTCTTTGGGATACATGGTGCAACTTCTAAATCTTGTTGTTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTCGGATATGGCAACGGGATTCCTATTGGGATGCACGTCCTTCCTCCAGGAGCAATGAATATCCACTTTTTATACCCCGACAAAATTATTGCTCTACTGCCGGGGAAAACTCATGGTCTACTGATAAAAGCTCAAGCAATTTCGGAGTTGCTTCAATGGAATCTGAGAAGAGAAATCGCCTAGATTCATCTGGGAATAGTAACTTCAACTATTCTTTAGCTTCTTCACACTCTGTTCAAACACATAAAGATCTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTTGCATGCATCACAGCTTACTGTTACAACTCCCTATGTTTGGATGTCCCTTCAGATGTATCAACGTTTGAGGCATTTGCAAAGTTATTGGCTACACTCTCATCATCTAAGGAAGTTCTATCTGTTTTTTCCCTGAAAATGGCTCAATCTAGGACATGCAAGCAAGTACAACAATCAAATAAATCTGTATGGAATATGAATTCTGCTATTTCATCTACTACTTTACTGGAAAGTGCACATTCTGTGCCCACAACGAGAATTGAAAATTATGTGCCAAGTTCTACTGCTAGTTTTCTTTACGCCACTGATTTATCTGACGGCAAAAATGAGTGCCTTATTGAAGGGTGGGATATTGTTGAGCATCCCACTTTTCCTCCCCCACCGTCGCAAAGTGAGGATGTTGAGCACTGGACTCGAGCAATGTTCATAGATGCTAGAAGAAAGTGA 1419 0.42 MSNCAICENSNQASICSICVNYRLNEYNTSLKSLKDRRDSLYSKLSDVLVRKGKGDDQANWRVLQNEKLARLKEKLRHSKEQVTQGRAKIETVSADLKLKYGLLESSLSTLEKNRLEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQKRVIIEGEIKDGCSGQYDQICNSRLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTAGENSWSTDKSSSNFGVASMESEKRNRLDSSGNSNFNYSLASSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSDVSTFEAFAKLLATLSSSKEVLSVFSLKMAQSRTCKQVQQSNKSVWNMNSAISSTTLLESAHSVPTTRIENYVPSSTASFLYATDLSDGKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDARRK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01279 472 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 4 393 - -
Spst8g01279 472 Coils Coil 62 89 - -
Spst8g01279 472 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 4 362 IPR018791 -
Spst8g01279 472 Coils Coil 24 44 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01279 - - pvu:PHAVU_008G169200g 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01279 8 11910891 11916861 Spst8g01279 8 11910891 11916861 ECH