Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01257 ATGGACAGTCCTGCGACTGAGAAGAAGATGAACGTGGGACTAAGCTTTCTGATGTTTACGTGTGTTCTTCCAATGATGGTCTCAGCCATACGCCCCCACCTCACCCCTTTCTATGTAAAGGGTCGTGTCTATTGTGATCCTTGTCGTGCTGGTTCTGAGACATCCCTCACCACTTACATTGTTGGTGTGGAGGTTACTCTGCAATGCAAGGACAAAATGAATGGCAACATTGTGTACAGCAAGAAGGATAAGAGTGATTCCTCGGGAACATACACCATTTTCGTGGACGCGAATCAAGCAAACCAAAATTGTGATGTGGGTCTCGTAACAAGTCCTTTACCTGACTGCAAAGAACCCAGTCCAGGACGTGACCACTCACGTGTCATTCTGAATCGCTTCAATGGTATTGCCACCAGTGATAGGTTTGTCAACAACTTGGGTTTCATGAAACAAAAGGTTGCATCTGCTTGTGCAAAGATTCTCAGGCCATACCCAGACTACGATGATGAATTAGTTCCACTCGATTCTTTTTTTTAA 537 0.4507 MDSPATEKKMNVGLSFLMFTCVLPMMVSAIRPHLTPFYVKGRVYCDPCRAGSETSLTTYIVGVEVTLQCKDKMNGNIVYSKKDKSDSSGTYTIFVDANQANQNCDVGLVTSPLPDCKEPSPGRDHSRVILNRFNGIATSDRFVNNLGFMKQKVASACAKILRPYPDYDDELVPLDSFF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01257 178 Pfam Pollen protein Ole e 1 like 39 120 - -
Spst8g01257 178 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 32 165 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01257 Spst-Chr8 11663742 11668983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01257 - - gmx:100796594 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01257 8 11663742 11668983 Spst8g01257 8 11663742 11668983 ECH
Spst8g01257 8 11663742 11668983 Spst9g01203 9 11224914 11226150 PCT