Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01250 ATGGACGGCATAATGAGCAAGCTTCGCAGCCTCGACGCGTACCCTAAAATCAACGAAGATTTCTACAGCCGCACGCTCTCCGGCGGTGTCATCACCCTCGCTTCCTCTATCCTAATGCTCTTGCTCTTCTTCTCTGAGCTCCGTTTGTACCTCCACGCGGTCACCGAGACCAAGCTTGTTGTAGACACTTCCAGAGGCGAAACGCTGCGTATCAATTTTGATGTCACGTTTCCTGCGCTTCCGTGTTCCATACTTAGTCTTGATGCCATGGATATCAGCGGAGAGCAGCATCTAGACGTTAAACATGATGTAATAAAAAAGAGATTAGACTCTCACGGCAATGTGATAGAAACGAGGCAAGAAGGAATTGGTGCTCCCAAGATTGAAAAGCCCTTGCAAAAACACGGAGGCAGGCTTGAGCATAATGAGACATATTGTGGTTCCTGTTTTGGTGCTGAAGCGTCAGATGATGAATGTTGTAATTCCTGTGAGGATGTTCGTGAAGCATACCGTAAGAAAGGTTGGGCACTTTCAAACCCAGATTTAATTGACCAGTTGGAGAGGCGTCTGTTCACCTTGTTGGATCTAGGTTCACCTAGTCTGCTTGCATCTTCATTCATCACATTCATTGTAACTGGGTCTGGTCATTACAGACACAGATCTGGAGTTAAGTTTGTGCAACTAATCAAGGATGAAGATGGCGAAGGATGCAATGTGTATGGTTTCTTGGAAGTAAATAAGGTTGCGGGGAACTTTCATTTTGCCCCTGGGAAAAGCTTTCAGCAATCTGGTGTACATGTACATGACCTTGTGTCTTTTCAAAAGGATTCTTTTAATTTAAGCCACCACATAAACAGATTATCTTATGGAGAGTATTTCCCTGGTGTTGTCAATCCTCTTGACAATGTGCATTGGAGACAAGAAACACCAAGTGGGATGTACCAATATTTTATTAAGGTTGTTCCGACTGTATACACTGACGTGAATGGGCATACTATCCAGTCAAATCAGTTCTCTGTGACGGAACACTTCAGGACTGGAGATGTGGGCCGTCTGCAGTCCCTCCCCGGAGTTTTTTTCTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACGGAAGAACATGTCTCATTCTTACATTTTCTTACTAATGTGTGTGCTATAGTTGGAGGTATTTTTACCGTTTCTGGAATATTAGATTCATTTATTTATCACGGTCAAAGGGCAATCAAGAAGAAGATGGAACTTGGTAAATTTAACTGA 1263 0.4323 MDGIMSKLRSLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDVIKKRLDSHGNVIETRQEGIGAPKIEKPLQKHGGRLEHNETYCGSCFGAEASDDECCNSCEDVREAYRKKGWALSNPDLIDQLERRLFTLLDLGSPSLLASSFITFIVTGSGHYRHRSGVKFVQLIKDEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLVSFQKDSFNLSHHINRLSYGEYFPGVVNPLDNVHWRQETPSGMYQYFIKVVPTVYTDVNGHTIQSNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQRAIKKKMELGKFN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01250 420 Pfam Endoplasmic reticulum vesicle transporter 149 188 IPR012936 -
Spst8g01250 420 Pfam Endoplasmic reticulum vesicle transporter 226 400 IPR012936 -
Spst8g01250 420 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Spst8g01250 420 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 419 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01250 Spst-Chr8 11544453 11553473 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01250 K20367 - gmx:100782309 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01250 8 11544453 11553473 Spst8g01250 8 11544453 11553473 ECH