Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01245 ATGGATTCTGGCAATAGTGGAAGTATCTCTTCAAGTGGCGACGAAGAATACGATTCACGACCTGATCACACAGTGCTCCCTCCAACCTTTCTTAATAACCACCCTTCCCAATTCGGCTCCATCTCACACCCTCTTGTTTCTTCTTCTCATTACCAGCACCACCACCCTCAACCCTCTTTGTTTGATCTCTCTTCAAGCTACCTCCACGCCCTTTCTCAACACAACTCCTCCAACCCAAACTCCTTCCTACACTTGGACACCGCCACGTCATCATCCTCCCAACCTCGAAGATCTGAACCCGATTGCACCGACCCTTCAGGGGTTAACGTTAACATTAACGTCACCTCGTCACCACAAACAACAACAAACATAAACCAATGCTTGTTGGGTCCTCAAGTAGGCCTCCCCACATACAATGCGAGGTCACAAGAGGCAGTCTTGCTCGAACCAGGTAGAACGGTTAATAACGTTGGGCGCAACTCAAAGAAGCGAACCAGGGCTTCAAGGAGAGCACCAACAACGGTTCTCACCACGGACACTTCTAATTTCAGAGCCATGGTTCAAGAGTTCACCGGAATCCCTGCACCACCGTTTTCGGCTTCTTCCTCGTACTCTAGGAGGCTCGATCTTCTAACTGGCTCATCCTCCTTGAGAAGCAGCTCTCACTTGGACACAACAACGGGTCCTTTCTATCCTTTGCGTCCTTCGCCACAAAAGGTACACCATCATCATCAACATCATCAAAACCCATTGCTTGTATCTTCCTCATCATCACCTTATAATAACATGGTTGATGCTATAGCTTCCACTACCACCACCAACAATTCCTCGTCCAATAACAGCAACAACCCCATTAACTACCAACAACTTCCTCCTGATTTGGGTTTACCCTATCATCATAACCAACAAAATATCATGCTGAGCATGCAGAACCACCCCAATCTTGCATTTCACCACCCTCCACTCCCTCTTCACCCTTTCGGCCATGCAGGGTTTGGTGCAAAGTTACCATCAATTGAGGATCTGGGCATGAGCCATGGTCAGGTTAATAATAATGCAAATTTTGTAGCAAGTGGGGTGTCGATGCCACTGAGGAGTGTTAACGACGATGGAGGAGGAACAAGAGATGTTTCGTTAAGGTCATTCGATGGTGGTGGTAGCTGCAAGTTGAACTTTTCTGTGGCTTCTGCGTCCACTAGCTTGAACCATGAGAAGAGCACCTTACAGAATAATAGCAACAATAATAACCCTACTACTAGAGGGGAAGGTACCGTGGATTCCTGGATTTGTTCTTCTGATTAG 1302 0.4724 MDSGNSGSISSSGDEEYDSRPDHTVLPPTFLNNHPSQFGSISHPLVSSSHYQHHHPQPSLFDLSSSYLHALSQHNSSNPNSFLHLDTATSSSSQPRRSEPDCTDPSGVNVNINVTSSPQTTTNINQCLLGPQVGLPTYNARSQEAVLLEPGRTVNNVGRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSASSSYSRRLDLLTGSSSLRSSSHLDTTTGPFYPLRPSPQKVHHHHQHHQNPLLVSSSSSPYNNMVDAIASTTTTNNSSSNNSNNPINYQQLPPDLGLPYHHNQQNIMLSMQNHPNLAFHHPPLPLHPFGHAGFGAKLPSIEDLGMSHGQVNNNANFVASGVSMPLRSVNDDGGGTRDVSLRSFDGGGSCKLNFSVASASTSLNHEKSTLQNNSNNNNPTTRGEGTVDSWICSSD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01245 433 MobiDBLite consensus disorder prediction 154 173 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 216 258 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 403 433 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 270 290 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 270 289 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 72 109 - -
Spst8g01245 433 MobiDBLite consensus disorder prediction 1 57 - -
Spst8g01245 433 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 324 IPR039609 -
Spst8g01245 433 Pfam VQ motif 170 197 IPR008889 -
Spst8g01245 433 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01245 Spst-Chr8 11477588 11478889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01245 - - gsj:114382008 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01245 8 11477588 11478889 Spst9g01187 9 10941248 10942306 PCT