Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01243 ATGAAGGGAGAGACGGCGACGCTGGTGCTGGTGAACCTGGCGGGGATAATGGAGAGGGCGGATGAGTCACTGCTTCCGGGAGTGTACAAGGAAGTGGGAGCGGCGCTCCATACCGACCCCACCGGCCTCGGTTCCCTCACTCTCTTCCGATCCATCGTTCAATCCTTGTGCTACCCCATTGCCGCCTACCTCGCCGTCCGCCATAACCGCGCCCACGTCATCGCCCTAGGCGCTTTCCTCTGGGCCGCCGCTACCTTCCTCGTTGCTTTCTCCTCCACGTTTTTCGAGGTAGCTTTATCACGAGCATTTAATGGTATTGGCCTTGCGCTTGTAGCACCTGCAATCCAATCTCTTGTTGCTGATTCAACTGATGATAGCAATCGTGGCATGGCTTTTGGATGGCTTCAACTAACAGGCAATGTTGGTTCAATTATTGGCGGCCTCTTATCAGTTTTGATAGCTCCAATAACAGTGTTTGGAATCCCTGGTTGGAGAATTTCCTTTCACATTGTTGCATTAATAAGCATTATCGTAGGTGTTTTAGTATACCTCTTTGCCAACGATCCACACTTCTCAAATAATGGTACAAATGATAGAAGGCTAGCTCCAAATAAAACATTTTGGTCTGAAGTGAAAGATCTGGTTCAGGAGTCCAAGTCAGTTTTGAAGATTTCGTCTTTCCAGATTATTGTTGCACAGGGTGTCACTGGCTCCTTTCCCTGGTCTGCTTTATCATTCGCACCAATGTGGTTAGAGCTTACTGGCTTCTCCCACAAGAAAACTGCTTTCCTCATAGCTCTGTTTGTGGTTGCCAGTTCTATTGGGGGATTGTTTGGAGGTAAGATGGGAGATATTCTCTCCAAGCATCTTCCAAATTCTGGGAGGATAATTTTGGCACAGATAAGCTCTGGATCAGCAATCCCCTTAGCAGCACTTCTTTTGCTCGGTTTGCCAGATGATCCATCCACAATAATATCTCATGGTTTTGTTCTAATTATTATGGGACTCTTGATATCTTGGAACGCTCCAGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCAGAGAGATCCCGAACTAGTGTATATGCCTTGGACAGATCTTTTGAGTCTATACTGTCATCTTTTGCTCCCCCTGCAGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCCATTCCTGAAGGGTCCAGTGAGTCTCAAGAGATTTTAACAGACAGAGAGAATGCTGCGTCATTGGCCAAGTCTCTTTACACAGCAATAGGAATCCCAATGGCTCTCTGCTGTATAATCTACACATTACTTTATAGAACATATCCAAGAGACAGGGAGCGAGCTAAGATGGAGGCTTTAATTGAATCAGAGATGCAATTAATTGAATCAGGTGGTTTAGCCATGGATAAAGAGTTTGAGCCAGAAGAATTGTCTATTGCAGATTATGATGGTGAAGAAAACACATTACTCTACCGGTAG 1476 0.456 MKGETATLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSLCYPIAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFEVALSRAFNGIGLALVAPAIQSLVADSTDDSNRGMAFGWLQLTGNVGSIIGGLLSVLIAPITVFGIPGWRISFHIVALISIIVGVLVYLFANDPHFSNNGTNDRRLAPNKTFWSEVKDLVQESKSVLKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHKKTAFLIALFVVASSIGGLFGGKMGDILSKHLPNSGRIILAQISSGSAIPLAALLLLGLPDDPSTIISHGFVLIIMGLLISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPIPEGSSESQEILTDRENAASLAKSLYTAIGIPMALCCIIYTLLYRTYPRDRERAKMEALIESEMQLIESGGLAMDKEFEPEELSIADYDGEENTLLYR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01243 491 Gene3D MFS general substrate transporter like domains 226 451 IPR036259 -
Spst8g01243 491 Gene3D MFS general substrate transporter like domains 5 193 IPR036259 -
Spst8g01243 491 PANTHER SPINSTER 6 459 IPR044770 -
Spst8g01243 491 Pfam Major Facilitator Superfamily 13 378 IPR011701 GO:0022857|GO:0055085
Spst8g01243 491 CDD MFS_spinster_like 8 433 IPR044770 -
Spst8g01243 491 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 444 IPR020846 GO:0022857
Spst8g01243 491 FunFam Major facilitator superfamily protein 1 396 - -
Spst8g01243 491 SUPERFAMILY MFS general substrate transporter 7 445 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01243 Spst-Chr8 11466523 11469625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01243 - - gmx:100783378 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01243 8 11466523 11469625 Spst8g01243 8 11466523 11469625 ECH