Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01241 ATGTCCACGTTGAAGCTGCCTCATCATGTTCCTCAGGCTGCCGAAGACTGTGAACAGCTCCAAAAAGCCGTCAAAGGTTGGGGGACTAACGAGGGGCTGATCATATCCATCTTGGGTCATAGAAATGCTGCTCAGAGGAAGCTTATCCGAGAAACTTATGCCAAGACCCATGGAGAAGATCTCCTCAAGGTCTTGGACAAAGAACTCACCAGTGATTTTGAGAGGCTGGTTCATCTTTGGACACTTGATACTGCTGAACGTGATGCATTTTTGGCAAATGAGGCAATTAAAAAGTGGACTCCAAGCAATCGGGTTCTGGTGGAAATATCCTGCGCTAGGTCCTCTGAACAATTGCTTGCTGTGAGGAGGTCTTATCATGCTCTTTATAAGAAGTCTATTGAGGAGGATGTTGCACATCACACAACAGGGGACTTCCGTAAGGTCCTACTACTTCTGGTTAGTTCTTATCGATATGAAGGAGAAGAAGTCAACTTGAACAGCGCAAAAACTGAGGCAAAATTACTGCATGACAAGATTTCAAAAAAGGCTTATAACGATGAAGACTTCATTAAGATTTTCGCTACAAGTAGCAGAGCACAGATTAATGCTGTTTTGAATCACTACAAAGACGAATTTGGAAAAGATATCAACAAGGACCTGAAGGCTGCTGATCCAAAGAATGAGTTCCTGGCTTTACTAAGAGCAACTGTGAAGTGCTTGATCCATCCTGAGAAGTACTATGCGAAGGTTCTTCGTTTGGCTATCAACGGGCGAGGAACCAATGAAGGAGACCTTACAAGAGTGGTGGCCACAAGGGCCGAAGTTGATTTGAAAATTATAGGAGATGAGTATCAAAGGAGGAATAGTGTCGCTCTTGATCGAGCCATTGGCAAGGACACCAGTGGTGACTATGAGAAAATGCTTTTGGCGCTCTTAGGACAGGGTGATGCTTGA 954 0.4434 MSTLKLPHHVPQAAEDCEQLQKAVKGWGTNEGLIISILGHRNAAQRKLIRETYAKTHGEDLLKVLDKELTSDFERLVHLWTLDTAERDAFLANEAIKKWTPSNRVLVEISCARSSEQLLAVRRSYHALYKKSIEEDVAHHTTGDFRKVLLLLVSSYRYEGEEVNLNSAKTEAKLLHDKISKKAYNDEDFIKIFATSSRAQINAVLNHYKDEFGKDINKDLKAADPKNEFLALLRATVKCLIHPEKYYAKVLRLAINGRGTNEGDLTRVVATRAEVDLKIIGDEYQRRNSVALDRAIGKDTSGDYEKMLLALLGQGDA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01241 317 Gene3D Annexin 83 154 IPR037104 GO:0005509|GO:0005544
Spst8g01241 317 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Spst8g01241 317 PRINTS Annexin family signature 299 312 IPR001464 GO:0005509|GO:0005544
Spst8g01241 317 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Spst8g01241 317 PRINTS Annexin family signature 255 275 IPR001464 GO:0005509|GO:0005544
Spst8g01241 317 PRINTS Annexin family signature 92 113 IPR001464 GO:0005509|GO:0005544
Spst8g01241 317 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 FunFam Annexin 166 241 - -
Spst8g01241 317 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 FunFam Annexin 1 82 - -
Spst8g01241 317 SUPERFAMILY Annexin 3 316 IPR037104 GO:0005509|GO:0005544
Spst8g01241 317 ProSitePatterns Annexin repeat signature. 259 311 IPR018252 GO:0005509|GO:0005544
Spst8g01241 317 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 SMART annex3 259 311 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 SMART annex3 183 232 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 Pfam Annexin 246 311 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 Pfam Annexin 171 223 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 Pfam Annexin 16 78 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 Pfam Annexin 88 152 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 FunFam Annexin 242 314 - -
Spst8g01241 317 PRINTS Plant annexin signature 119 133 IPR009118 -
Spst8g01241 317 PRINTS Plant annexin signature 161 181 IPR009118 -
Spst8g01241 317 PRINTS Plant annexin signature 227 245 IPR009118 -
Spst8g01241 317 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Spst8g01241 317 Gene3D Annexin 165 241 IPR037104 GO:0005509|GO:0005544
Spst8g01241 317 ProSiteProfiles Annexin repeat profile. 166 238 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 Gene3D Annexin 242 317 IPR037104 GO:0005509|GO:0005544
Spst8g01241 317 ProSiteProfiles Annexin repeat profile. 242 313 IPR018502 GO:0005509|GO:0005544
Spst8g01241 317 PANTHER ANNEXIN 13 312 - -
Spst8g01241 317 FunFam Annexin 83 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01241 Spst-Chr8 11448949 11451535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01241 K17098 - gmx:100784252 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01241 8 11448949 11451535 Spst8g01241 8 11448949 11451535 ECH