Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01239 ATGTCCATACTTCACAAATTAAAGGCAACGCCAGTGTACCTGTCGGAAATCGCTCCACCCAGATGGCGCGGCGCATTCAACACGGGGTTCCAATTCTTCATCGGAATCGGCGTGGTGTTGGCGAACTGCATAAACTACCGCACGGCGAGGGTCCCATGGGGGTGGCGCGTGTCCCTGGGCCTGGCTACAGTCCCCGCAATCATCATGACAATCGGCGCATTTCTAATCCCCGACACTCCCAGCAGCCTAGTAGAGCGCGACCACATAGACCAAGCCCGAAACGCCCTCCGCAAAGTCCGGGGATCCACCGTCGACGTGGAACCCGAACTCCAACAACTCATAAAATCCTCGCAGGTTTCGAAAGCCATGGAAAATGAAAGCATTACGACCATTTTTGAGGAACAGTACCGGCCTCAGTTGGTGATGGCGTTCGCTATTCCGCTTTCTCAGCAGCTTACGGGGATCAACATTGTGGCCTTCTATGCGCCAAACCTTTTTCAGTCTGTGGGCTTCGGCAATGACTCCGCGTTGCTCTCCGCCGTTATACTTGGACTCGTCAACCTGGCTTCCATCCTTGTCTCAACTGCGGTTGTCGATCGCTTTGGCAGAAGATTCTTGTTCATAGCCGGTGGCGTTCAAATGCTTCTCTGCATGCTCGCGGTGACTATTGTGCTGGCAGTGGTGAGTGGTGTACATGGTACCGAGCACATTTCAAAGGGCAATGCCATAGTGGTACTAGTATTATTGTGCTTCTACGCTGCAGGTTTTGGTTGGTCCTGGGGCCCTCTTTGCTGGCTAATTCCAAGTGAGATTTTCCCCTTTAAGATAAGATCCAATGGACAAAGCATAGCCGTGGCAGTGCAATTCTTAACCGTCTTCGTTCTATCCCAGACATTCTTGACAATGCTTTGCCACTTCAAGTTTGGGGCTTTTCTCTTCTACGCGGCTTGGATTGCAATCATCACCATCTTTGTCATACTGTTCTTGCCCGAGACCAAAGGAATTCCTTTGGATTCAATGTATGCAATATGGAGCAAACACTGGTATTGGCGAAGGTTTATTGTTAAAGGACAACTTACCCAAGATAATCCTTCCAATGAATAA 1104 0.5018 MSILHKLKATPVYLSEIAPPRWRGAFNTGFQFFIGIGVVLANCINYRTARVPWGWRVSLGLATVPAIIMTIGAFLIPDTPSSLVERDHIDQARNALRKVRGSTVDVEPELQQLIKSSQVSKAMENESITTIFEEQYRPQLVMAFAIPLSQQLTGINIVAFYAPNLFQSVGFGNDSALLSAVILGLVNLASILVSTAVVDRFGRRFLFIAGGVQMLLCMLAVTIVLAVVSGVHGTEHISKGNAIVVLVLLCFYAAGFGWSWGPLCWLIPSEIFPFKIRSNGQSIAVAVQFLTVFVLSQTFLTMLCHFKFGAFLFYAAWIAIITIFVILFLPETKGIPLDSMYAIWSKHWYWRRFIVKGQLTQDNPSNE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01239 367 NCBIfam sugar porter family MFS transporter 10 338 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst8g01239 367 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 333 IPR020846 GO:0022857
Spst8g01239 367 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 8 354 IPR045262 GO:0015144
Spst8g01239 367 CDD MFS_STP 9 331 IPR044778 GO:0015145|GO:0015749
Spst8g01239 367 Gene3D MFS general substrate transporter like domains 4 347 IPR036259 -
Spst8g01239 367 Pfam Sugar (and other) transporter 10 344 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst8g01239 367 FunFam Sugar transport protein 3 2 347 - -
Spst8g01239 367 SUPERFAMILY MFS general substrate transporter 10 338 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01239 Spst-Chr8 11433308 11434500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01239 8 353 Organic Solute Cotransporters AT1G34580 62.178 1.44e-156 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01239 K24193 - pvu:PHAVU_008G173200g 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01239 8 11433308 11434500 Spst8g01239 8 11433308 11434500 ECH