Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01237 ATGCAGAAGAAGCTAGGATTCCCAATCTCCAAGAGCCTGGACCAATTCAAATCGTTGTACGGTTCCATTTCGGGAACTTCCAAGCCATTATCTTCGCGTCCTTCTGCGGATTCCGTTTCATCGGGAAGTTTTGCAAGCCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCCGTGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTGTGTGCATGCATTAGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAACTCAAGGTCAAGCAGAAGGAAGATGAGAAACTGTGGAAGGGACTGGAGTCTAAATTCTCTTCTACTAAGACTTTATGTGATCAACTTACGGATACTTTACAGAAGTTGGCTGGTTTAGTTCAGGATGCCGAAAAGGATAAGGAAACATTGGAAAATAAACTGTCAGCAAGTTCAGAAGCTCTTGATAGCTTGAATAAACAGATGGATGGTTTGTCTTTGAAGCTAGATTCTGCTCAGGAAACAATTAGAACCCGTGATAACGAGCTAGAGAAGCTTAAATTTGCTACAGAAGAAAAAGAGAAATTTCACAGAGATGAACATTGCAGAATTGCTAATCTTATACAAGAGAAAGATAATATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAATTTGGAAGAGGTTCACCTTCAGATAAAAGTTAAAGAAGATGAAATTATACACCACATAACCAGTCAACAGAAGTTGGAGAAAGAAAAGAGTGATCTTCAATTGTTGAATGCTGGGCTTGCAGAAAAGCTTGACATGTCACTTCAGGAAATTAAAAACCTTAAAGAAAAACTTCAGTCATTGGCTGCACATTTGTCTAATTTAGACAAGGAAAGCTTGAATCTTTTGAACAAGTTTGATGAAATGAGTTTGCTTTATGCTTCATGCTTCCAGTTGGTTCAGAAGGAAAGAGAAACTTTCTCAAGCCATGCTCAATACCAGTATAGTGAGCTTAATAATAAATTTGTAGTCTTGGAATTAGAAAAGAACACAATTCAAATGAAAAATCTCGAGTTAAGCAAAACTGTGGATGAACTTCAGAAAGTTCAAGAATCTACTGCAGCCCAACTTACACAGGACTCTCGATTAGCTGCTGAGAGAATTCAAATTTTGGAGTCAGATATTGAAAGTTTAATCTCAAAAAAGAAAGAAGCAGAGTTATTAATTTCCAAATTAGAAGAGAAAGCTGACTCTCTATTAGAGAGTTCTAGATCATCAGAGAACCACGTGCAAGACTTACAGCTGAAGGTTTCAGCATTAGAGACTGAAAACAAAGAAAATACAGAAAGACTGCAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTCTGCAAAAGGAGAGAATGAAACTAGAGCAGCATGCTGATTCTCTTGATAAAGAAGTAATCCAGCTCCGTAATGCCATGGAGGAAAAAGAACAGTGTATTTTACATTGCAAGGAACAGGAAAAGAATCTAGAAGATCAAATCACAGAGAAAATATCACTATTGACTGCAGCTGAAAGCAAACTTTCAGAAGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGACGTTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTGACTATGGAAAAAGACAAGGCTGACAAAACTATTGCCGAAATTGAGGGAAGGTGTGATAAAAAACTTGCAGAATGCAAAGAAGAATCAAGCCAGCAGTTGATGCGCATTCAGGGGGAACACGCGTTGCTGGTTAGTCAAATGCAGCAGGAGCATGACAAGAAGCAACTAAGCCTCATAGCTGAACACAATGAACAGCTAAAGCGTACCCAACTGCAAGCTGAAAATGAACTGAGAGAGAAAACAATGTTTATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTCGGAAGCTGGAAGAAGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCGTCAATAAAGAGAAGGAGTTCTTGTGGTGGCAAAAGAAATCAGCAGCATAACCTGGACTCTCCTTACTTTGAAGCAACACAAACACCAGTACCAAAGTTGTTGAAAAAAGTGGACAACAGTAAAACCGGAAATGCAGTGAGCATTCCCAAGCATCATAGAAAGGATCCTACAAATCGAAAGACTAATACACCAAAAGTAAATACTCCTGGAAGTGTTGTTAAGAACATCAAAGGAGGAGGACATACTCATCCTTCAAATATAGGTGATTTGTTTTCTGAAGGGTCTCTTAATCCCTATGCAGATGATCCCTACGCATTTGATTAG 2517 0.3826 MQKKLGFPISKSLDQFKSLYGSISGTSKPLSSRPSADSVSSGSFASLKLTAEKLVKEQASVKTDLENANAKLKKSQECVHALEEKLQNALNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTDTLQKLAGLVQDAEKDKETLENKLSASSEALDSLNKQMDGLSLKLDSAQETIRTRDNELEKLKFATEEKEKFHRDEHCRIANLIQEKDNMIRNLEEMLTSSRLATENLNSNLEEVHLQIKVKEDEIIHHITSQQKLEKEKSDLQLLNAGLAEKLDMSLQEIKNLKEKLQSLAAHLSNLDKESLNLLNKFDEMSLLYASCFQLVQKERETFSSHAQYQYSELNNKFVVLELEKNTIQMKNLELSKTVDELQKVQESTAAQLTQDSRLAAERIQILESDIESLISKKKEAELLISKLEEKADSLLESSRSSENHVQDLQLKVSALETENKENTERLQAEILKKSEEIDTLQKERMKLEQHADSLDKEVIQLRNAMEEKEQCILHCKEQEKNLEDQITEKISLLTAAESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDVKRKYELEKMEIVTMEKDKADKTIAEIEGRCDKKLAECKEESSQQLMRIQGEHALLVSQMQQEHDKKQLSLIAEHNEQLKRTQLQAENELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKRNQQHNLDSPYFEATQTPVPKLLKKVDNSKTGNAVSIPKHHRKDPTNRKTNTPKVNTPGSVVKNIKGGGHTHPSNIGDLFSEGSLNPYADDPYAFD 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01237 838 Coils Coil 640 660 - -
Spst8g01237 838 Coils Coil 230 250 - -
Spst8g01237 838 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 26 730 - -
Spst8g01237 838 Coils Coil 121 176 - -
Spst8g01237 838 Coils Coil 396 514 - -
Spst8g01237 838 MobiDBLite consensus disorder prediction 714 838 - -
Spst8g01237 838 Coils Coil 666 686 - -
Spst8g01237 838 MobiDBLite consensus disorder prediction 725 755 - -
Spst8g01237 838 Coils Coil 526 546 - -
Spst8g01237 838 Coils Coil 566 586 - -
Spst8g01237 838 SUPERFAMILY Tropomyosin 79 316 - -
Spst8g01237 838 Coils Coil 258 306 - -
Spst8g01237 838 Coils Coil 51 106 - -
Spst8g01237 838 Coils Coil 205 225 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01237 - - gmx:100788684 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01237 8 11404023 11411982 Spst8g01237 8 11404023 11411982 ECH