Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01232 ATGCACGCCACCAAGTTTGACGCGCCGACTTCCCCTAGTGTAAATAAGGCATTTGTTTTAGTTGTTGTCGTTGTTGTTGGTTTCAGGGTGGGTTTTATTGGTGTTACCATAAGAACATTTATTCATAGGTTAACTTGTTTGGCTACTTTGGTGACTAGTCAGAGAATGTCCAGGCCTCTGCAAAGAGGTGTGTCTGGTGGGGTTAGGGTCCCTGAGAGTGGCCATGACTTGTGGGACTCCCAATCTAAAGATAAAACAGAAAAGGAAGATTTAGATAAGAGGGGTTCTTCAGATCATAGCCCTTTTGCTTTGAGGTTTCCTTTGAGGTTGATTTTGGGAAATAATTCTGATTCCAAATGTGGCAATGGCATAGGTGAGAATGGTTTTGCATCAGATTCCTTCATTGTTAGCTCCCCGCGAAGCCGGCTTAAGCTGATGCTGCTTTCTTTGAAGTTTAGTTTAGTGTTCATTGTTTTTCTGGCTCTTACTGGATCTTTCTGGTGGACTTTATCGATTTCATCCTCGTCAAGAGGTCACATTTACCATGGTTATAGAAGGCTTCAAGAGAAGCTTGTCTCAGACCTTTTGGACATTGGTGAGTTTTCTCGCGGTCCGTTGAGGTTGAAGGAATCGGAATTCTGTTCTCAGGATTCGGAAAACTTTGTTCCTTGCTACAATGTTTCTGAGAATGTGGAATTGGAAGTTTCTGATGGCAGTGAAGTTGACAGGCAATGCGGTCGTGAGCTTAGGCAGAACTGTTTAGTTCTGCCACCAGTGAATTACAAAATTCCTCTAAGATGGCCTACTGGAAAAGATGTTATCTGGGTTGCTAATGTGAAGATAACAGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACAAAGAGAATGATGATGCTGGATGAAGAGCAAATTTCATTTCGTTCAGCCTCTCACATGTTTGATGGTGTTGAAGACTACTCACATCAAATTGCTGAAATGATTGGACTTAGAAATGAATCTTATTTCATACAAGCCGGGGTTCGAACTATATTAGACATAGGTTGCGGCTATGGAAGCTTTGGAGCACATCTCTTTGACAGTCAGCTCTTAACTATGTGCATTGCAAACTATGAACCTTCTGGCAGTCAAGTTCAACTCACACTCGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCGAAGCAGTTGCCATTTCCATCTCTATCCTTTGATATGTTACATTGTGCCAGATGTGGCATTGATTGGGACCAGAAAGATGGCGTTCTCTTGATTGAAGCGGATAGACTTTTAAAACCGGGTGGATACTTTGTTTGGACATCACCACTAACAAATGCTCGTAACAAAGAGAATCAGAAAAGATGGAAGTTTATACATGATTTTACGTTAACTCTTTGCTGGGAACTGCTGTCACAACAAGATGAAACTGTTGTATGGAAGAAAACTGCTAAAAAAAGTTGCTATGCTTCAAGAAAGTCAGGTTCTGGCCCTTCTTTGTGTGGTAGAGGTATTGACGTGGAGACTCCATTTTATCGAGAACTGCAAAACTGCATAGGAGGAATGCAGAGCGCCCGATGGGTTCCAATTGAAGAAAGGGAAAGATGGCCTTACCGTTCTAACTTGAACAAAAACGAGTTGGCTATCTACGGCTTGCAGCCAGATGAGCTTACCGAGGACTCTGACAGCTGGAAAACAGCAGTCCAGAATTATTGGTCACTCCTGTCACCTTTAATATTTTCGGATCATCCGAAGAGGCCTGGTGATGAGGACCCTTCACCCCCTTACAACATGCTCAGAAATGTGCTAGACATGAATGCTCATTTTGGTGGCTTTAATTCTGCATTGTTGCAAGCTAGAAAGTCTGTGTGGGTGATGAATGTTTTCCCAATAAGTGGACCCAATTATCTTCCCTTGATCCAGGACAGAGGATTTGTTGGTGTTCTCCATGACTGGTGCGAGGCTTTTCCAACATACCCTAGAACCTATGACTTGGTGCATGCAGCAGGATTTTTATCCCTTCAAACTGAGCAGCACAGATGCACTATGCTTGACGTGTTCCTTGAAATTGACAGGATACTTCGCCCAGAGGGTTGGGTTATAATTCGCGACATAGTTCCCATAATAGAATCAGCTAGAACTCTAACAGCACAGCTAAAGTGGGATGCAAGAGTGATAGAAATTGAAAATGACAGTGATCAGAGACTCCTGATCTGCCAGAAACCTTTCTTTAAGAGACAAGCAAGCTAA 2247 0.4286 MHATKFDAPTSPSVNKAFVLVVVVVVGFRVGFIGVTIRTFIHRLTCLATLVTSQRMSRPLQRGVSGGVRVPESGHDLWDSQSKDKTEKEDLDKRGSSDHSPFALRFPLRLILGNNSDSKCGNGIGENGFASDSFIVSSPRSRLKLMLLSLKFSLVFIVFLALTGSFWWTLSISSSSRGHIYHGYRRLQEKLVSDLLDIGEFSRGPLRLKESEFCSQDSENFVPCYNVSENVELEVSDGSEVDRQCGRELRQNCLVLPPVNYKIPLRWPTGKDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESYFIQAGVRTILDIGCGYGSFGAHLFDSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPFPSLSFDMLHCARCGIDWDQKDGVLLIEADRLLKPGGYFVWTSPLTNARNKENQKRWKFIHDFTLTLCWELLSQQDETVVWKKTAKKSCYASRKSGSGPSLCGRGIDVETPFYRELQNCIGGMQSARWVPIEERERWPYRSNLNKNELAIYGLQPDELTEDSDSWKTAVQNYWSLLSPLIFSDHPKRPGDEDPSPPYNMLRNVLDMNAHFGGFNSALLQARKSVWVMNVFPISGPNYLPLIQDRGFVGVLHDWCEAFPTYPRTYDLVHAAGFLSLQTEQHRCTMLDVFLEIDRILRPEGWVIIRDIVPIIESARTLTAQLKWDARVIEIENDSDQRLLICQKPFFKRQAS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01232 748 Gene3D Vaccinia Virus protein VP39 298 479 IPR029063 -
Spst8g01232 748 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 220 740 IPR004159 GO:0008168
Spst8g01232 748 MobiDBLite consensus disorder prediction 76 98 - -
Spst8g01232 748 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 553 707 IPR029063 -
Spst8g01232 748 FunFam probable pectin methyltransferase QUA2 302 482 - -
Spst8g01232 748 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 93 743 IPR004159 GO:0008168
Spst8g01232 748 MobiDBLite consensus disorder prediction 62 98 - -
Spst8g01232 748 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 336 486 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01232 Spst-Chr8 11336990 11341471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01232 K23870 - gmx:100805992 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01232 8 11336990 11341471 Spst8g01232 8 11336990 11341471 ECH