Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01145 ATGAGTTGTAGTTCAAAGGGAGTTTGCATTTTGTCATCACTAGTCACCATTTGTTGGAGAGAAGAGAATCAAGAGATGGTTCGACCAATTAGGTCAAGAATAAGTTCACTTCTCTGTGCAAAGGCACCTTTAGTAGCCTCACATGTCTATGAATCATGGTGTTGCTCACGTTTCTCTGGTCGAACCAGCTCCTCCTTTATGAGGCCTTGGCCAAAATTTATGGATTGGATACAGATGAACAGTTGTCGTGCAGCAGCATCATTGCCTTTGATCAAAGAGAAACAGCCAGAGGGTCCTAGTTACTGTGCCAGACTGGATCGAGAAAACAAAGGTCTTGATGAAGGGAATATGAGTGAAACTGATGATTATCAAAATTTGTTTGGCTTAATGAAACAGAGGTTTATGAGTTTCAAGAACCAGAAATACATAAAAGAGTTGGAGCATTTTCAAGCTCTTGAAGAAGCTCAATCTCCAAAGTTTATGGTAATTGCTTGTGCAGACTCTAGGGTATGCCCCTCTAACATATTAGGATTCCAACCTGGAGAAGCCTTTATGATACGTAACATTGCCAATCTTGTACCTCCGATGAAGAATGGACCATCAGAATGTAATGCTGCTCTTCAGTTTGCAGTAACTACTCTTCAGGTTGAGAATATATTGGTCATTGGTCATAGTAGCTGTGCTGGAATTGAAGCTTTGATGAATATGCAAGAAGATGTAGAATCAAGGAACTTCATACACAAGTGGGTTGCCAGTGGAAAACTTGCCAAACTGAAGACAAAAGCTGTCACAGCTCATCTTAGCTTTGATCAGCAATGCAAATTCTGTGAGAAGGAATCTATTAACCAATCATTACTGAACTTGCTCAGTTATCCGTGGATAGAAGATAGAGTGAGAAGAGAGTTGCTTTCTCTTCATGGAGGATATTATAATTTCTCCAATTGCTCTTTTGAGAAATGGACCCTTGATTTTAAAAGATGCAATGTTAAAGAAGAAGGGAGCAGTTATGTGGTGAAAGAACAAGATTTCTGGTGCTGA 1038 0.3979 MSCSSKGVCILSSLVTICWREENQEMVRPIRSRISSLLCAKAPLVASHVYESWCCSRFSGRTSSSFMRPWPKFMDWIQMNSCRAAASLPLIKEKQPEGPSYCARLDRENKGLDEGNMSETDDYQNLFGLMKQRFMSFKNQKYIKELEHFQALEEAQSPKFMVIACADSRVCPSNILGFQPGEAFMIRNIANLVPPMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMNMQEDVESRNFIHKWVASGKLAKLKTKAVTAHLSFDQQCKFCEKESINQSLLNLLSYPWIEDRVRRELLSLHGGYYNFSNCSFEKWTLDFKRCNVKEEGSSYVVKEQDFWC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01145 345 SUPERFAMILY beta-carbonic anhydrase, cab 121 327 IPR036874 GO:0004089|GO:0008270
Spst8g01145 345 CDD beta_CA_cladeB 133 320 IPR045066 GO:0004089|GO:0008270
Spst8g01145 345 PANTHER CARBONIC ANHYDRASE 117 326 IPR001765 GO:0004089|GO:0008270
Spst8g01145 345 FunFam Carbonic anhydrase 122 329 - -
Spst8g01145 345 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 165 172 IPR015892 GO:0004089|GO:0008270|GO:0015976
Spst8g01145 345 SMART Pro_CA_2 153 321 IPR001765 GO:0004089|GO:0008270
Spst8g01145 345 Pfam Carbonic anhydrase 161 314 IPR001765 GO:0004089|GO:0008270
Spst8g01145 345 Gene3D Carbonic anhydrase 118 330 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01145 Spst-Chr8 10154541 10156822 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01145 K01673 - gmx:100812124 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01145 8 10154541 10156822 Spst8g01145 8 10154541 10156822 ECH