Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01139 ATGTTGCAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCATGTCAGGACAAAGCAGTCAAAATGGCTGGATCAAAGCCTCCAAGATATGGAGGAGAAGGTGGCTGCAACCCTCGTTGTGTTGCGAGATGAGGGGGACTCATTTGCTAAGCGGGCAGAAATGTATTACAAGAAGAGGCCAGAGTTAGCAAATTTTGTGGAAGAAGCATTTGGAGCATATAAAGCCTTAGCAGACAGATATGATCATTTATCAAAGGAACTTCAAAGTGCCAACCGCACCATAGCCAGTGTCTTCCCAGACCAAGTTCCATGTCCTAGTGAAGAAGATGAAGAAGAAGAAAGTGATACAGGAACTAATTCATTATCACCAGACCCCAAGAATCAAACACATAATAAACCATCCATTCCTAAAGTTCCAAACATCCCAAAGAAGCATATTAGAAGTCAATCCATGTCGATCTCCAGAAAGGGCACGCTTAAGAGGACTATTAGCACTGCAAAATATGTTCCAACAATTTCATGTTCAGGTCTGACCAAGGTTGAAGCCTTGGAAGAAATTGACAAGCTTCAGAAAGAAATATTGTCACAGCAAACTGAGAAAGAGTTTGTGAGGAGTTTGTATGAACGCGCCAATAAAAAGTACTGGGAAATCGAAGACCAGATCGCAGCAACACAGAAAAGAGTTTGCAGCTTGCAAGATGAGTTTGGTGTTGGGACAGTGATAGAAGACAATGAGGCTAGAGCTTTGATGGCAGCAACGGCTCTAAAATCATGCCAAGAGACCCTGGATAAGTTGAAAGAGATACAAGCTCAATCATCTAAAGAAGCTAAAGAGGAGTATCAAAGGGTAAAGAAAGCTCATGAGATGTTTGAGACCCTTAGAGACCAATTCATTTCTAAATATATGACAAAACTAGACAATGATTATGGGGACAAATGTAAGACTGTAGGAGCAGATAAAAAACGTATAGATGACGATATGGATAGCTTGGAGCAACAGGAGAATGATGTTGGGTTATTGAGAGAGAAGATTAAACAAAAGTTGGCAGAAGATTCAAGGAATTCCCTCACTGTGACTGAAATGGCTGAGTGCATTGACGAGCTTGTAAATAAGGTTTGTACCTTGGAAACTGCGGTTTCATCTCAGACTGGTTTGGTAAAGAGACTAAGATCAGAAACAGATGGACTTCAGAAAAATATGAGGAAGTTGGAAGAAGACAAGGAAATGCTCATAGAAGGCTCAGAAGTCACCAACAAGAAGCTAAAGGAATTGGAGAAAGAGTTATGGAGAGTTAAATTGCTCAACCGAAGTGTCAGAAGTCAAGACAACACCCTCCAAACACACTTTACTGAAGCTAGCTGTAACCTTGAGCACCTTTCTGGAAAATTGGATGACATGAAGCCAGATGAGGAGGAGGAGGAGAACTTCGTACTTTACAAGAAGAAGAGGAATGCTTCTGATGGTAAACCCGGGGAAAAATCTGAAAAACATGGTGATGAATTGTCTGTTGATAACTCAAATGTCAAGACAATAAAGGAATATAATGGTGCAAATTTTGATAATAACAAGTTTAATTCGGATAGTAGTTTTTTGAATCAAAGGATTCAAAAGCTGGCACAACAGGAAAAGGATGATTTATCTGATACAGTGAGCAATATTGACAGTGAATCCCATGATTTGGACACTAGGGAGGTTGATCAACCTAACTGGAGGCAGATGTTTATAAGTGGATTAGATGACAGAGAAAAGATTCTGCTGGATGAGTACACATCAGTTTTAATGAACTATAAGGATGTCAGGGTGAAGCTCAATGATGTGGAAAAGAAAAACCGGGACATCATTTTTGAGTTGACACTTCAGCTAAGGGAGATGAAGAATGCTCTTGTCGCAAAGGATAAAGAGATACAGTTTTTACATCAGAAGATGAATTCTCCAGATGAAAATCCTGATGAAACTCCCTACACTAACACCACAGAATACAAATATACACCAAATGAAGCACTTCTTCGGGCAGCAGGTGAAGGAGCAAATGGGTCAGAGTCAGAATTTTCACATGTAAATACAGATGCAAATGCAGTCACAACCCCTTTCTCAGAACATCAAGGTGAAACTGAAAGCACAAGAAATCCGAATTCATCAAGTATGAAAATGACACTTGAGAAGCTCATGGAAAATCAAGATAAACGCCGTGATCTTTCAAACTTAGAACAGAAATTCCGTTCAGACATCGACAACTTAATGGAAGAGAACCTAGAGTTCTGGTTGAGGTTTAGCACTTCAGTTCATCAAATTCAAAAGTTCCAAAACTCAATTCAGGACTTAAAAGCTGAGCTGAAAATGATAAAGGAAAAAGACAACAATTCTGAAGGGTATTCACAACAAAAACAACAGCCTATACAATCTGAGCTCAGGCCAATATTCAGACACCTTAGAGAAATAAGAACTGAATTATCACTGTGGGTGGAACATAATGCAGTGCTTCAGGATGAACTGCAAGGAAGGTACTCGTCTTTGTGCAACATCCAAGATGAGATTGCAAGAGCAGGGAATGCCGAATCCAGTGGCGACCAGGCTGAGCTAATTAGCAAGTACCAAGGTGCAAAGTTTCAAGGTGAGATTCTCAACATGAAGCAAGAGAATAGCAAGGTTGCAAGTGAACTGCAAGCAGGTCTTAGCCTTGTGAAGGGAATGAAAGATGATGTTGAGAAGACACTTGATGAGCTAGATGAAGCTATTGGAGTTAATAGTATTATTAAAAAGAATACCGGCCAGTTGAAACATTCCAGTAGTCGTGTTCGAATACCCTTAAGGTCTTTCTTGTTTGGAGTCAAGTTAAAGAAACAAAGACATCATCCTTCACTATTTGCATGTGTCAACCCAGCATTGCAAAGACAAAACAGTATGAATGAACAAGCACCAGCTCCAATATAA 2940 0.4014 MLQRAASNAYSWWWASHVRTKQSKWLDQSLQDMEEKVAATLVVLRDEGDSFAKRAEMYYKKRPELANFVEEAFGAYKALADRYDHLSKELQSANRTIASVFPDQVPCPSEEDEEEESDTGTNSLSPDPKNQTHNKPSIPKVPNIPKKHIRSQSMSISRKGTLKRTISTAKYVPTISCSGLTKVEALEEIDKLQKEILSQQTEKEFVRSLYERANKKYWEIEDQIAATQKRVCSLQDEFGVGTVIEDNEARALMAATALKSCQETLDKLKEIQAQSSKEAKEEYQRVKKAHEMFETLRDQFISKYMTKLDNDYGDKCKTVGADKKRIDDDMDSLEQQENDVGLLREKIKQKLAEDSRNSLTVTEMAECIDELVNKVCTLETAVSSQTGLVKRLRSETDGLQKNMRKLEEDKEMLIEGSEVTNKKLKELEKELWRVKLLNRSVRSQDNTLQTHFTEASCNLEHLSGKLDDMKPDEEEEENFVLYKKKRNASDGKPGEKSEKHGDELSVDNSNVKTIKEYNGANFDNNKFNSDSSFLNQRIQKLAQQEKDDLSDTVSNIDSESHDLDTREVDQPNWRQMFISGLDDREKILLDEYTSVLMNYKDVRVKLNDVEKKNRDIIFELTLQLREMKNALVAKDKEIQFLHQKMNSPDENPDETPYTNTTEYKYTPNEALLRAAGEGANGSESEFSHVNTDANAVTTPFSEHQGETESTRNPNSSSMKMTLEKLMENQDKRRDLSNLEQKFRSDIDNLMEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKMIKEKDNNSEGYSQQKQQPIQSELRPIFRHLREIRTELSLWVEHNAVLQDELQGRYSSLCNIQDEIARAGNAESSGDQAELISKYQGAKFQGEILNMKQENSKVASELQAGLSLVKGMKDDVEKTLDELDEAIGVNSIIKKNTGQLKHSSSRVRIPLRSFLFGVKLKKQRHHPSLFACVNPALQRQNSMNEQAPAPI 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01139 979 Coils Coil 624 644 - -
Spst8g01139 979 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Spst8g01139 979 Coils Coil 389 430 - -
Spst8g01139 979 MobiDBLite consensus disorder prediction 544 565 - -
Spst8g01139 979 Coils Coil 182 202 - -
Spst8g01139 979 Coils Coil 210 230 - -
Spst8g01139 979 MobiDBLite consensus disorder prediction 99 161 - -
Spst8g01139 979 Coils Coil 76 96 - -
Spst8g01139 979 Coils Coil 732 752 - -
Spst8g01139 979 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Spst8g01139 979 PANTHER PROTEIN NETWORKED 2D 1 972 - -
Spst8g01139 979 MobiDBLite consensus disorder prediction 121 138 - -
Spst8g01139 979 Coils Coil 979 979 - -
Spst8g01139 979 Coils Coil 767 787 - -
Spst8g01139 979 MobiDBLite consensus disorder prediction 464 507 - -
Spst8g01139 979 Coils Coil 333 353 - -
Spst8g01139 979 MobiDBLite consensus disorder prediction 476 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01139 Spst-Chr8 10095779 10099533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01139 - - pvu:PHAVU_008G182000g 1570.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01139 8 10095779 10099533 Spst8g01139 8 10095779 10099533 ECH
Spst8g01139 8 10095779 10099533 Spst9g01094 9 9789154 9792597 PCT