Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01127 ATGATTTTTCAAAAGGTAAAAGCATTGAACAGATATGAAGGTGTCGAGCGAATCAAACCCCAAATTTCTCCGCTCCCTAACGCTATCGAGCCAAACCCAAACGTTAACTCAGAAGCACCAGCAGAACACGAAGACATAAAAGCGAACCACTCTCAACTCTTCGACGTCGATACCGGATTCCTATTTGTTCTTTCTATTATTACTTTCAATCATCTGAATTCTTTCGAATTATTCGTTTTCGACGCGTGCGTTTCAATCGACGCAGATCGCGTTTCGCAAGCTGCAATGGCGACGTTCGAACTGTACCGCAGGTCGACGATCGGAATGTGCCTGACGGAGACGTTAGACGAGATGGTTCAGAACGGTACTCTCAGCCCGGAGCTTGCGATTCAGGTTCTGGTCCAGTTTGATAAGTCCATGACCGAGGCTCTGGAAACGCAAGTTAAGAGCAAGGTTTCCATCAAGGGCCATCTGCATACTTATAGATTTTGTGACAATGTTTGGACCTTCATCTTACAAGATGCATTGTTTAAGAACGAAGACAGCCAAGAGAATGTTGGACGGGTTAAAATAGTGGCGTGTGACTCGAAGTTGCTCACACAATAA 606 0.4505 MIFQKVKALNRYEGVERIKPQISPLPNAIEPNPNVNSEAPAEHEDIKANHSQLFDVDTGFLFVLSIITFNHLNSFELFVFDACVSIDADRVSQAAMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01127 201 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 147 197 IPR009088 GO:0005672|GO:0006367
Spst8g01127 201 CDD TFIIA_gamma_N 99 146 IPR015872 GO:0005672|GO:0006367
Spst8g01127 201 Gene3D - 98 149 IPR009083 GO:0005672|GO:0006367
Spst8g01127 201 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 96 201 IPR003194 GO:0005672|GO:0006367
Spst8g01127 201 CDD TFIIA_gamma_C 152 197 IPR015871 GO:0005672|GO:0006367
Spst8g01127 201 Pfam Transcription initiation factor IIA, gamma subunit 155 196 IPR015871 GO:0005672|GO:0006367
Spst8g01127 201 Gene3D - 150 200 IPR009088 GO:0005672|GO:0006367
Spst8g01127 201 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 99 144 IPR015872 GO:0005672|GO:0006367
Spst8g01127 201 FunFam Transcription initiation factor IIA subunit 2 96 149 - -
Spst8g01127 201 FunFam Transcription initiation factor IIA subunit 2 150 201 - -
Spst8g01127 201 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 99 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01127 K03123 - gmx:100814623 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01127 8 9925002 9930590 Spst8g01127 8 9925002 9930590 ECH