Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01083 ATGAAGAACCTTCTCTTCCTCTTCCCCTGTCTTTTTCTCCTCCTTTCCTCCGCCGTCAGCGCCGTCCCCGCCCACAACATCACGCGCATCCTCGAAAAACATCCAGGCTTCTCCACCTTCAATCACTACCTTACCGTCACCCATCTCGCTGACGAGATTAACCGCCGCCAGACCATCACCGTCCTCGCCATCGACAATGCCGCCATGTCCACCGTCCTCGACAAGCATCTCTCCCTCCCCACTCTCAAAAACGTCCTGTCCCTCCACGTCCTCGTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCAACAACAGCACCACCCTCGTTTCCTCCATGTTTCAGGCCACCGGAGCCGCTTCCGGTACCTCCGGCTACGTCAACATCACCAATCTCAAAGGCGGGAAGGTGGGCTTCGCCGCCGAAGACAACGACGGCGCCCTCCACTCCTTCTACGTGAAATCCGTCCAAGAACTCCCCTACTACATCTCCGTCCTCCAAATCAGCAACGCCATAAGCTCCGCCGACGCCGAAGCCCCCACCGCCGCACCCTCCGCCATCGACCTTATCTCAATTATGTCCAAACAAGGTTGCAAGGCCTTCGCTGACCTTCTAAGAGGCTCCAAAGCGCTTCCAACTTTCAAGGAAAACATCGACGGCGGCTTAACGGTTTTCTGCCCCACCGACAGCGCCGTCAACGGCTTCGCCCCCAAGTACAAGAACCTCACCGACTCTCAAAAAGTCTCCCTCTTGTTATATCACGGCGTTCCCGTTTACCAGTCCCTGCAGATGCTGAAGTCCAGCAACGGCATCATGAACACTCTCGCCACCGAGGGAGCCAACAAGTACGATTTCACCGTCCAGAACGACGGCGAAGACGTGAGTCTGAAGACCAAGGTTAACACCGTGAGTATAATTGGCACGCTTATAGATCAAGACCCTTTCGTGGCCTACAAGATCAACAAGGTGTTGATGCCCAGAGAGTTGTTCAAGGCCAGCGACGTCGAGCAAGCACCCGCAGAGTCACCGAAGCCTGCGAAGAAGAAGTCGAGTAAGAATGCGAAGGCCGCCGATGCACCCGCCGACGGACCGGCGTCGGATTCCAACGATCAGAAGGCTGCTGATGAAGACAGCAATGGGGTAAGTGGATTGCACGAGGGCGTAAGATTGGTGTCGGTGGTGTTGAGTTTGTTCGTTGGATTTTTGGCTTTATGA 1215 0.5564 MKNLLFLFPCLFLLLSSAVSAVPAHNITRILEKHPGFSTFNHYLTVTHLADEINRRQTITVLAIDNAAMSTVLDKHLSLPTLKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGAASGTSGYVNITNLKGGKVGFAAEDNDGALHSFYVKSVQELPYYISVLQISNAISSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRGSKALPTFKENIDGGLTVFCPTDSAVNGFAPKYKNLTDSQKVSLLLYHGVPVYQSLQMLKSSNGIMNTLATEGANKYDFTVQNDGEDVSLKTKVNTVSIIGTLIDQDPFVAYKINKVLMPRELFKASDVEQAPAESPKPAKKKSSKNAKAADAPADGPASDSNDQKAADEDSNGVSGLHEGVRLVSVVLSLFVGFLAL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01083 404 MobiDBLite consensus disorder prediction 341 355 - -
Spst8g01083 404 FunFam Fasciclin-like arabinogalactan protein 10 178 327 - -
Spst8g01083 404 SUPERFAMILY FAS1 domain 183 327 IPR036378 -
Spst8g01083 404 ProSiteProfiles FAS1/BIgH3 domain profile. 24 191 IPR000782 -
Spst8g01083 404 ProSiteProfiles FAS1/BIgH3 domain profile. 185 324 IPR000782 -
Spst8g01083 404 MobiDBLite consensus disorder prediction 334 380 - -
Spst8g01083 404 Gene3D FAS1 domain 24 156 IPR036378 -
Spst8g01083 404 Gene3D FAS1 domain 189 326 IPR036378 -
Spst8g01083 404 SUPERFAMILY FAS1 domain 30 143 IPR036378 -
Spst8g01083 404 SMART fasc_3 223 327 IPR000782 -
Spst8g01083 404 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 391 IPR033254 -
Spst8g01083 404 FunFam Fasciclin-like arabinogalactan protein 2 23 165 - -
Spst8g01083 404 Pfam Fasciclin domain 36 110 IPR000782 -
Spst8g01083 404 Pfam Fasciclin domain 198 326 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01083 Spst-Chr8 9385118 9386332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01083 - - gmx:100805178 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01083 8 9385118 9386332 Spst8g01083 8 9385118 9386332 ECH