Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01082 ATGGAAGGTGAAAGGGTTGAATTGCTTAGTGCAGTTGAGGATCAATATGGAGGAGTTGTTGTAAACGTGGAGGATCAAGAGCCTTTGGATTCTAAGCTCTTCTCTTCCATATTGGAAGCTTCAATGAACAATTGGCGGCAACAGGAAAAGAAAGGGGTCTGGCTCAAGTTGCCCATACAGCATTCAAATCTTGTTGATTCTGCGGTGAAGGCTGGCTTTAGGTACCACCATGCTGAGGCAGATTACTTGATGCTTGTGCGTTGGATTCCAGATACTCCTGATACCTTTCCTGCAAATGCTTCACATCGCGTAGGCGTTGGTGCTTTTGTCTTTAACAACAACAAGAAGGAGGTGCTTGTGGTACAGGAAAGAGGTGGCAAATTCAGAGGCTCTGGTGTATGGAAGATGCCTACAGGAGCTGTTAATGAAGGTGAGGATATTTGTGAAGCTGTGATTAGAGAAGTAAAAGAAGAGACAGGAATAGAGACAAAGTTTGTTGAAGTTTTATCTTTCAGGCAAAGTCATAAGTCATTCTTCGAGAAATCAGATTTGTTCTTTGTTTGTATGTTGCAACCTCTATCCTTTGACATTCAGATTCAGGCTTCAGAAATTGAGGCAGCTAAGTGGATGCCAATTGAAGATTATGCTGCCCAGCCTTTTGTGCAAGAAAATGACAGTGGGTTGTTTGTTGAAGTTGTATAA 702 0.4231 MEGERVELLSAVEDQYGGVVVNVEDQEPLDSKLFSSILEASMNNWRQQEKKGVWLKLPIQHSNLVDSAVKAGFRYHHAEADYLMLVRWIPDTPDTFPANASHRVGVGAFVFNNNKKEVLVVQERGGKFRGSGVWKMPTGAVNEGEDICEAVIREVKEETGIETKFVEVLSFRQSHKSFFEKSDLFFVCMLQPLSFDIQIQASEIEAAKWMPIEDYAAQPFVQENDSGLFVEVV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01082 233 ProSitePatterns Nudix box signature. 139 160 IPR020084 GO:0016787
Spst8g01082 233 FunFam nudix hydrolase 2 6 94 - -
Spst8g01082 233 CDD Nudix_Hydrolase_12 102 223 - -
Spst8g01082 233 PRINTS NUDIX hydrolase family signature 134 148 IPR020476 -
Spst8g01082 233 PRINTS NUDIX hydrolase family signature 148 163 IPR020476 -
Spst8g01082 233 FunFam Nudix hydrolase 8 103 232 - -
Spst8g01082 233 Pfam NUDIX domain 102 223 IPR000086 -
Spst8g01082 233 Gene3D - 6 94 - -
Spst8g01082 233 SUPERFAMILY Nudix 70 225 IPR015797 -
Spst8g01082 233 PANTHER NUDIX HYDROLASE RELATED 4 225 IPR003293 -
Spst8g01082 233 Pfam Nudix hydrolase domain 9 89 IPR040618 -
Spst8g01082 233 ProSiteProfiles Nudix hydrolase domain profile. 101 233 IPR000086 -
Spst8g01082 233 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 103 228 - -
Spst8g01082 233 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 188 212 IPR003293 -
Spst8g01082 233 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 83 99 IPR003293 -
Spst8g01082 233 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 61 79 IPR003293 -
Spst8g01082 233 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 99 117 IPR003293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01082 Spst-Chr8 9379071 9382311 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01082 K26956 - gmx:100818821 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01082 8 9379071 9382311 Spst8g01082 8 9379071 9382311 ECH