Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01047 ATGCAAAGACTCTCTACCACTGCTCGTTCTTCTTCCATCTCCGCCTTATTGCGCTATGGCGGCGCACTTCGCAGGGACGTGGTTGCTCCCATTTCCTCTTCTAACTTAGCTAAGGTGGGTGAGAATGACACCCAAGTTAGATGGTTTTCTATTCTGGGTTCGGACAAATCCAGCACTATTGAATCTGCAAATCATCCAAACTTAAGAAAAGATTTGATTTTGGGTAGACGATATGAATCAACTGCTGCTGAATCTTCTTCTACTTCCCCACCAGCCGAGAGATATGAGTATCAAGCTGAGGTTAGTCGGCTCATGGACCTCATTGTTAACAGTTTATACAGTAACAAGGAAGTGTTTCTTAGGGAGCTTATTAGCAATGCAAGTGATGCTTTGGATAAGCTGCGGTTTCTGAGTGTAACTGAGCCTGGGCTTTTGAAGGACGCAGTTGATTTTGATATTCGAATTCAAACTGATAAGGATAACGGGATCATATCTATTACTGATACAGGCATTGGGATGACTAGGCAAGATCTAATTGATTGCCTTGGAACTATCGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTCTAAAGGATAGCAAGGATGCTGGTGGTGACAACAACTTAATAGGTCAATTTGGTGTGGGATTTTATTCTGCTTTTCTGGTTGCTGATCGGGTGGTTGTCTCAACAAAGAGTCCAAAATCTGATAAGCAATATGTATGGGAAGGAGAGGCAAATGCTAGCTCATATACTATAACTGAGGAGACAGACCCTGAGAAGCTGATTCCAAGAGGAACACGTCTTACACTGTATCTTAAGAGGGATGACAAAGGATTTGCACATCCAGAGCGGATTCAGAAGCTTGTGAAAAACTATTCACAATTTGTTTCATTCCCGATATACACTTGGCAGGAAAAGGGATATACCAAAGAAGTGGAAGTGGATGAGGATACAGATGAAGCCAAAAGGGATGATCAAGATGAGAAGACTGAGAAAAAAAAGAAAACTAAAACTGTTGTTGAGAAGTACTGGGATTGGGAGCTGACAAATGAGACCCAACCTATCTGGCTTCGTAATCCTAAAGAAGTCACTAAGGAGGAGTACAATGAATTCTACAAGAAAACTTTTAATGAATACTTGGAGCCATTAGCATCGTCACACTTTACCACAGAGGGTGAGGTAGAATTTAGATCTATACTATACGTTCCTGCCTTCGCTCCCTCAGGGAAGGATGACATAATCAATCCTAAGACCAAGAATATAAGACTTTACGTGAAGAGAGTTTTCATTTCAGATGACTTCGATGGAGAACTGTTCCCCCGATACTTAAGCTTTGTCAAAGGTGTTGTTGACTCAAATGACCTCCCACTCAATGTGTCGCGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAACGCTTAGTGCGAAAAGCTTTTGACATGATTCTTGGAATATCCATGAGTGAGAACAGAGAGGACTATGAGAAGTTCTGGGAGAACTTTGGCAAACACTTGAAATTGGGTTGCATTGAAGACCGTGAGAATCACAAACGTATTGCTCCATTGCTTCGCTTTTTCTCATCCCAAAGTGATGAAGAACTGATTGGCTTGGATGAATATGTTGAGAACATGAAACCTGATCAAAAGGACATTTATTACATTGCTGCTGACAGTGTGACCAGTGCGAAGAACACACCTTTCTTGGAGAGACTTGCGGAGAAGGATCTTGAAGTTATGTTTTTGGTGGATCCAATAGACGAGGTTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATAAGAATGAGGAAAAGGAAAAAGAAATGAAGCAGGAATTTGGCCAAACATGTGACTGGATGAAGAAACGATTGGGAGATAAAGTTGCAAGTGTGCAAATCTCAAACCGACTTAGCTCTTCACCCTGTGTTCTGGTGTCTGGAAAATTTGGTTGGTCTGCAAACATGGAAAGGCTGATGAAGGCACAAAGTATGGGTGATGCATCCAGCTTGGAGTTCATGAGGAGTAGAAGGGTGTTTGAGATCAACCCTGACCATGCCATTATCAGGAATTTGGATGCTGCATGCAAAACAAATCCCGATGATGAAGATGCCCTCAGAGCTATCGATCTTTTGTATGATGCAGCTTTGGTTTCCAGTGGTTTTACGCCTGAAAATCCAGCACAACTTGGAGGGAAGATATACGAGATGATGGGAATGGCTCTCACTGGTAAATGGTCAACACCTGATCAGTTCCACTCCACTGTGACCATGCCCCATATCCCAGAAACTGTAGAAGCTGAGGTTGTTGAACCTACTGAGGCTGGCCGTCAGAAGTGA 2388 0.4238 MQRLSTTARSSSISALLRYGGALRRDVVAPISSSNLAKVGENDTQVRWFSILGSDKSSTIESANHPNLRKDLILGRRYESTAAESSSTSPPAERYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKDAVDFDIRIQTDKDNGIISITDTGIGMTRQDLIDCLGTIAQSGTAKFLKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPKSDKQYVWEGEANASSYTITEETDPEKLIPRGTRLTLYLKRDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDTDEAKRDDQDEKTEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPAFAPSGKDDIINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENREDYEKFWENFGKHLKLGCIEDRENHKRIAPLLRFFSSQSDEELIGLDEYVENMKPDQKDIYYIAADSVTSAKNTPFLERLAEKDLEVMFLVDPIDEVAIQNLKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEFGQTCDWMKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQSMGDASSLEFMRSRRVFEINPDHAIIRNLDAACKTNPDDEDALRAIDLLYDAALVSSGFTPENPAQLGGKIYEMMGMALTGKWSTPDQFHSTVTMPHIPETVEAEVVEPTEAGRQK 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01047 795 Hamap Chaperone protein HtpG [htpG]. 81 755 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Spst8g01047 795 FunFam Heat shock protein 90 alpha 611 759 - -
Spst8g01047 795 FunFam heat shock protein 90-5, chloroplastic 351 523 - -
Spst8g01047 795 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 93 307 IPR036890 -
Spst8g01047 795 Gene3D - 80 323 IPR036890 -
Spst8g01047 795 Gene3D - 611 758 IPR037196 -
Spst8g01047 795 Gene3D - 351 523 - -
Spst8g01047 795 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 84 764 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Spst8g01047 795 Coils Coil 791 795 - -
Spst8g01047 795 Pfam Hsp90 protein 280 760 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Spst8g01047 795 SUPERFAMILY HSP90 C-terminal domain 634 754 IPR037196 -
Spst8g01047 795 ProSitePatterns Heat shock hsp90 proteins family signature. 113 122 IPR019805 GO:0005524|GO:0006457|GO:0051082
Spst8g01047 795 CDD HATPase_Hsp90-like 102 297 IPR020575 -
Spst8g01047 795 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 115 275 IPR003594 -
Spst8g01047 795 SUPERFAMILY Ribosomal protein S5 domain 2-like 353 611 IPR020568 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 114 136 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 181 198 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 93 113 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 210 232 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 283 301 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 163 180 IPR020575 -
Spst8g01047 795 PRINTS 90kDa heat shock protein signature 265 282 IPR020575 -
Spst8g01047 795 FunFam heat shock protein 90-5, chloroplastic 80 322 - -
Spst8g01047 795 PIRSF HSP90_HTPG 58 787 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Spst8g01047 795 Gene3D - 524 610 - -
Spst8g01047 795 FunFam Heat shock protein 90 524 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01047 Spst-Chr8 9186692 9191767 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01047 K09487 - gmx:100794913 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01047 8 9186692 9191767 Spst8g01047 8 9186692 9191767 ECH