Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01013 ATGACTGTGGGGGCAGGGATATCTGTTGCAGATGGAAACTTGATGGTGTTGGGGAAGAAAGTGCTGAGCCATGTCCATGAGAAGGTTGTTGTCAACCCTGTATGTGGGGGTAATTTGCTCAATGGGGCATTCATTGGGGTTGAATCCCATCAGAAGGGTAGTCGCACAGTCTTCCCAATCGGCAAGCTTGAGGGATTGCGGTTTATATGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTTGCGGACAAGAAGTCCCCATTGAGACGCAGTTCTTGCTTGTTGAAGCACAAAGTGGCTCTGATATTGATGCAGGAGAAGACCAAGCTGCTGCTACCTATGCAGTTTTCTTACCCCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCAAAACGAGATTGAGATCTGTGTAGAAAGTGGTTGTCCAGCTGTGGAGGACTTCGATGGGGCTCATTTGGTTTATATTGGGGCTGGATCCGACCCTTATGAAGTCATAACAACTGCTGTCAAGACTGTTGAGAAACACTTGCAGACCTTTGTTCATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGCACATGGGATGCTTTCTACACTAATGTCACTTCAGAGAATGTGAAGCAAGGATTACAGAGCTTCGAGAAAGGTGGAATTCCTGCTAAATTTGTTATAATTGATGATGGGTGGCAAACTGTTGGCATGGACCCCAACGGTACTGAATGGAAATCTGATAATGCAGCCAACTTTGCAAATCGCTTAACTAACATCAAAGAGAATCACAAATTCCAGAAAGATGGCAAGGAAGGCCAGAGAGTAGAGGACCCAGCTCTGGGACTTCGTCAGATTACTAATGAAATCAAACTAGAGCATGATATAAAGTACGTATATGTTTGGCATGCGATAACAGGATATTGGGGTGGTGTTAAACCTGGGGTTCCCGGCATGGAGCACTACGAGTCAAAGCTGGCCTTCCCTGTCTCATCTCCTGGAGTTAAGTCAAATCAACCAGATGAAGTTTTGACAACCATTGCCATCAATGGGCTTGGCCTTGTGAATCCTGAGAAAGTTTTTCACTTTTATGACGAACTTCACTCATATTTGGCATCTTCTGGTATTGATGGTGTCAAGGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGCGGGTGAAACTTGCAAGGAAATACCACCAGGCATTAGAGGCATCAATTTCTAGGAACTTTCCTGATAATGGAATCATTTGTTGCATGAGTCACAACACTGATGGACTATACAGCGCAAAGCGTTCGGCTGTTATTAGGGCATCAGATGATTTCTGGCCAAGAGACCCTGCTTCCCATACGATTCACATTGCATCAGTGGCTTACAATACTATTTTCCTTGGTGAATTCATGCAGCCAGACTGGGATATGTTTCATAGCCTACATCCAATGGCTGAATACCATGCAGCAGCACGAGCTGTAGGGGGATGTCCGATTTATGTCAGTGACAAGCCTGGATACCATGACTTCGATCTTTTGAAGAAACTTGCACTACCGGATGGTTCTATATTAAGGGCTAAACTTCCTGGAAGACCCACAAAGGATTGCTTATTTAGTGATCCTGCCAGAGATGGAAAGAGTCTTCTGAAGATTTGGAACATGAATGATTTTTCTGGAGTCGTTGCGGTATTCAATTGCCAAGGAGCTGGTTGGTGCAAAGTTGGCAAGAAGAACCTTATCCACGATGAGAATCCAGGCACTGTCACAGGTTTCATTAGAGCTAAAGATGTTGACTACATATCCAGGATAGCAGATGATAAATGGACAGGAGATGCCATTATATATTCCCATCTTGGTGGAGAACTGGTTTACCTTCCAAAGGATGCAACCATCCCAGTGACCTTGAAAACCCGGGAATATGAAGTTTTCACAATAGTTCCGGTGAAGGAATTGACCAATAACATCAAATTCGCTCCTATTGGTTTAATAAAGATGTTCAATTCAGGAGGGGCTGTCAAAGAGTTCTTCAGTTTGAAATCTAATGAAAGTACAAATGTAGCCATGAAAGTCCGTGGTTGTGGCCAATTTGGTGCTTATTCATCAGCTCGGCCTAAGTTGATAACAGTTGATTCAGAAGAGGTAGAATTCAAGTATGAGGAAGAATCTGGATTGGTGACTATTGATTTGGGAGTACCTGAGAAAGAGTTATACCAATGGAGTATTTCAATTGATTTTTGA 2271 0.4381 MTVGAGISVADGNLMVLGKKVLSHVHEKVVVNPVCGGNLLNGAFIGVESHQKGSRTVFPIGKLEGLRFICVFRFKMWWMTQRMGTCGQEVPIETQFLLVEAQSGSDIDAGEDQAAATYAVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEDFDGAHLVYIGAGSDPYEVITTAVKTVEKHLQTFVHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQSFEKGGIPAKFVIIDDGWQTVGMDPNGTEWKSDNAANFANRLTNIKENHKFQKDGKEGQRVEDPALGLRQITNEIKLEHDIKYVYVWHAITGYWGGVKPGVPGMEHYESKLAFPVSSPGVKSNQPDEVLTTIAINGLGLVNPEKVFHFYDELHSYLASSGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGYHDFDLLKKLALPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNDFSGVVAVFNCQGAGWCKVGKKNLIHDENPGTVTGFIRAKDVDYISRIADDKWTGDAIIYSHLGGELVYLPKDATIPVTLKTREYEVFTIVPVKELTNNIKFAPIGLIKMFNSGGAVKEFFSLKSNESTNVAMKVRGCGQFGAYSSARPKLITVDSEEVEFKYEEESGLVTIDLGVPEKELYQWSISIDF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01013 756 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
Spst8g01013 756 Gene3D Aldolase class I 198 525 IPR013785 -
Spst8g01013 756 PANTHER - 1 753 IPR008811 -
Spst8g01013 756 Pfam Raffinose synthase or seed imbibition protein Sip1 8 739 IPR008811 -
Spst8g01013 756 FunFam Probable galactinol--sucrose galactosyltransferase 1 199 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01013 Spst-Chr8 8796947 8800591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01013 1 754 Glycoside Hydrolase AT1G55740 72.185 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01013 K06617 - gmx:100785506 1451.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01013 8 8796947 8800591 Spst8g01013 8 8796947 8800591 ECH