Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00997 ATGAGCGGCGGTGGTGGGTCTTCCACTTTTAGGGTTCCGATCCCAAACAATGTACGCAAAATCATACAAGACATCCGCGAGATCACCGGCAAGCAGCACACCGACGACGAAATCTACGCCGTCCTCCGCGAATGCTCCATGGATCCCAACGAAACCGCTCAGAAGCTTCTCTATTTAGATACCTTTCATGAGGTGCGAAGGAGACGTGACCGAAAGAAGGAGGGATTGGGCAGCAGGGCTACTGATGAGCCTAGGATAAAGCAAGGTGGCCAAGGGAGGGGGGGAAGGGGTACTTCTGGAGGATATTCCTCTAACTTTCCTGATGGTGGTGGTGGGAGGAACACAGCTAATCGGAGGGAAAATGGGGTCAATCACATTGCAGAGAGAAGTCATGCTCCCTCTACTCAGCCGGTGTTGCAGAAAACTAAGACTAATACAACATCTCAAGTTACAAGAGTTTCAGCTGTTACACCCCATGGTGCTGCAAATCAATCCAATGGGAAGTCAGTTCATGGTTCTGTTGGCCAATCTCCCATAGTTGGTGTACCTAAAAGTAGTTCGGCTTCTAATGACACTGGCTATGAAGAACCACAAGCTGCTGCTGTTGCTACACCCTCTTCCCCCACTCAAACTTTTGGTGGCTTAGTTACTAGTAATGACCAAGGAAAGCCTTTGTCAAGTTCTGATTTACTTCAAACTTCTGTCTCGGGTGTCCATTCCTCTTTGGATCCTGTAGTAGCATCATCTGTCTCCCGGAATCCTGGTGTCAGTGGTGCAATCAGTAGGGAAGTTGGAAGCAACCGGATATCTGCTGGACCAAATCATGTTAAAGGAAATCAAGTTGTTGTTCAAGAAGTTAATGATTTAATAGCATCCAAGAATGATAAATCTGAGTCCCTGAATTCAATAAGCAAAACAAATGCCCCACAAAAGTCAAATGAAGTTGAACATAATCGGTTATCTGAGCCATCACAACTTTCCTGTCCATCCGCAAATGATTCATTGAGGCCATCTTCTAGTTCTGGCAGCCAGCCACCTCTAGGTAAATGTCTTTTTGTGAGCTCACATGTTTCTGAAACGGCTAATATCACAGAGGTTTCACCTTCACAACCTTGTGTGCAATCCTCGACAGAGTTGAGGCAACATGTTACTTTTCCAAACCATTTTCAAGTACCCAAGGCTTTAAAAAGTGGTCTGACATTTGGAAGCTTTGATACTTGTGGCCCAAGTGAAAAATCTAACAGTGGAACTGATGGGGACAATAATGTTACATGTGCTCTTGAACCTTTGCCAGTGAGCGATGAAGCAGCAACTTCAAGCAACCAAAAGACATCATTAACTTCACAAGGGGATCATCTTGATTATCCACATTCTTCATCTTACGTGATTGAAAAGACACCAGCTACAGAAGGCAATCCTATAACTGGTACCGACACAAAGGTTGATCAGCCAAAGAAGGAGGTTTTGTTGGCTCCTGAGGGTCATCAACTTCCAACTGTTCAAACTGCTCAAAACTATGGTTTGAATTTCATGTCCACCATGTTAGGAACTCAGCAAATTCAATTTGAGGGAACAGAGCCTCAGGCACAAGATACATCTCGTTTTCCTAACTTTGTTAATGCAAGTTCTCAAGCTGTGTCCCCTAGCCCAACTCCACCCCTACAGAGCTCTATACCTGTGTCTCCACAGTCAGTTTCTATTTTCAGGCCACCCTACCCTACTAACTTCTTCCCTTATGGCCACTATTACCCTCCAATTTATGTGTCTCCCATACACCAATTTTTAAGCCACAACGGTTTCCCTCAACAGCCATCGGCTGGTAACATGTATCTACCAGCAGCTGCTGGCATCAAATTCCCCCTCCCTCAGTTCAAGGCAGGAGCAAACACAGGAAATGCAGCTCATATTGGAATTCCTTCTGGATCATTTATCACTCCACCTGTAGGTTATGCGCCAGGTCAAACAGTTAATACTGGAAGCTCCGCTGGAAATGAAGATCTTGCAGTGTCGCAGTTAAAAGAAAACCAGATCTATACAACGGGGCAGTTGAGTGAAGGATCTGCAGTGTGGATACCTGCTCCAGGCCAAGACATATCCAGTTTGCAAGTTAATTCTCTGTATAACCTTACTGCTCAGGGACAACATCTCACCTTCCCCCCAACACAGGCTGCTCATGGAGCATTTGCTGGTATCTATCAAGCAGGGCAGACAGTAGCTTCACCTTCAACCCTTTTGCAACAGTCTCAAGCTGTGGCTGGGCCTGTTGAAACCGTAGGGCCCCCTTCAGGATCTTATCAACAACCTCAGCCTGCGCAGATCAATTGGAACTCTAATTTTTAG 2340 0.4573 MSGGGGSSTFRVPIPNNVRKIIQDIREITGKQHTDDEIYAVLRECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLGSRATDEPRIKQGGQGRGGRGTSGGYSSNFPDGGGGRNTANRRENGVNHIAERSHAPSTQPVLQKTKTNTTSQVTRVSAVTPHGAANQSNGKSVHGSVGQSPIVGVPKSSSASNDTGYEEPQAAAVATPSSPTQTFGGLVTSNDQGKPLSSSDLLQTSVSGVHSSLDPVVASSVSRNPGVSGAISREVGSNRISAGPNHVKGNQVVVQEVNDLIASKNDKSESLNSISKTNAPQKSNEVEHNRLSEPSQLSCPSANDSLRPSSSSGSQPPLGKCLFVSSHVSETANITEVSPSQPCVQSSTELRQHVTFPNHFQVPKALKSGLTFGSFDTCGPSEKSNSGTDGDNNVTCALEPLPVSDEAATSSNQKTSLTSQGDHLDYPHSSSYVIEKTPATEGNPITGTDTKVDQPKKEVLLAPEGHQLPTVQTAQNYGLNFMSTMLGTQQIQFEGTEPQAQDTSRFPNFVNASSQAVSPSPTPPLQSSIPVSPQSVSIFRPPYPTNFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNMYLPAAAGIKFPLPQFKAGANTGNAAHIGIPSGSFITPPVGYAPGQTVNTGSSAGNEDLAVSQLKENQIYTTGQLSEGSAVWIPAPGQDISSLQVNSLYNLTAQGQHLTFPPTQAAHGAFAGIYQAGQTVASPSTLLQQSQAVAGPVETVGPPSGSYQQPQPAQINWNSNF 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00997 779 MobiDBLite consensus disorder prediction 202 227 - -
Spst8g00997 779 MobiDBLite consensus disorder prediction 67 227 - -
Spst8g00997 779 MobiDBLite consensus disorder prediction 293 347 - -
Spst8g00997 779 MobiDBLite consensus disorder prediction 67 81 - -
Spst8g00997 779 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 778 IPR044277 -
Spst8g00997 779 MobiDBLite consensus disorder prediction 434 455 - -
Spst8g00997 779 MobiDBLite consensus disorder prediction 97 121 - -
Spst8g00997 779 Pfam GBF-interacting protein 1 N-terminal 14 74 IPR009719 -
Spst8g00997 779 SUPERFAMILY UBA-like 14 75 IPR009060 GO:0005515
Spst8g00997 779 MobiDBLite consensus disorder prediction 128 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00997 Spst-Chr8 8670294 8677669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00997 - - gmx:100815261 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00997 8 8670294 8677669 Spst8g00997 8 8670294 8677669 ECH