Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00995 ATGACACCGACAATGACAGACTTCTCGTGCTTGAACCAGGAAACAAGTGAAGGGAGAGAAAGAGAAAGAGAGGAGGAACTCCTTACCCTATCCTCTGCAATGGCTGAGGTTGTCGACAATCTACACCACTCCAAACTTTCCATGCCTGAAGAAAGCGAAGAGGTGGATGACTCTCCGATTGAGCAGGTGAGGTTGACGGTTCCAATAACCGACGACCCTACGCAGCCAGTGCTGACATTCAGGACATGGACTCTGGGGCTGGCGTCATGCATTATCCTTGCATTCATCAACCAATTTTTCGGCTACAGAACCACCCCACTCTCTGTTTCTTCTGTGTCAGCACAGATCATCTCTCTTCCACTTGGCAAACTCATGGCCGCAACACTTCCAACCAAAGCATATCTTTTCCCCTTCACCAAGTGGTCTTTCTCCTTGAACCCTGGCCCATTCAATATGAAGGAGCATGCACTCATCACCATCTTTGCAAGTGCTGGATCTAGTGGTGTCTATGCCATCAACATTATCACTATTGTTAAGGCTTTCTACCACAGGAGCATCCACCCAATGGCTGCTTTTCTGCTAGCCCTATCCACCCAGATGCTTGGTTATGGATGGGCTGGGATTTTCAGAAAATTCCTTGTGGATTCCCCGTACATGTGGTGGCCTTCAAACCTTGTTCAGGTGTCTCTATTCAGGGCATTCCATGAAAAGGAGAAAAGGCCTAAAGGAGGAAACACAAGGCTGCAATTCTTTTTCCTGGTCTTTGTATCAAGCTTTGCTTATTACATTATTCCAGGCTACTTGTTCCAAGGATTAGCAACAATCTCCTTTGTATGCTTAGTTTGGAAAAACTCCATCATTGCTCAACAAATTGGTTCGGGCATTTCTGGCCTTGGCATTGGTTCATTTGGCCTTGACTGGAACACAGTGGCTGGCTTCTTGGGGAGTCCTTTGGCTGTACCTGGCTTTGCCATCATCAACGTTCTGGTTGGATTTGTGCTCTTTATGTATGTTCTGATTCCCATTTCATATTGGAACAACGTATATGATGCCAAGAAGTTCCCCATCATCAGTTCTAAAACGTTTGATTCTACTGGAGCTAAATATAATGTCTCTCGGATTCTGAATGCTGCATACTTTGACATTGATATGGATAATTATAACAATTACAGCAAGCTCTATCTTAGTGTCACGTTTGCATTCGTATATGGATTGAGCTTTGCAACTCTCACGGCCACTATTTCGCATGTTGTCCTCTTCCATGGAAAAATGATTGTTCGAATGTGGAAGAAGACAACATCTGCACTGAAAGAGAAAGAACTTGGAGATGTGCACACAAGAATTATGAAGAAAAACTATGAAGAAGTACCTGAGTGGTGGTTTGTGAGCATTTTACTTTTGATGATAGTTGTGGCCCTGATAACTTGTGAAGGCTTCGGCAAGCAACTTCAGTTGCCATGGTGGGGAGTCCTAATGTCTCTTGCTATTGCGTTAGTTTTCACTTTGCCAATTGGGGTTATCCAAGCAACAACAAACATGCAAGCCGGACTCAACGTGATTACAGAGTTGATAATTGGGTACCTTTACCCCGGAAAGCCACTTGCTAATGTAGCCTTCAAGACTTACGGCTACATCAGCATGTCACAGGCACTCGCCTTCCTTGGTGACTTCAAACTAGGCCACTATATGAAAATTCCTCCAAAATCTATGTTCATCGTGCAGTTGGTAGGTACCGTAGTTGCTTCAGGTGTGTACTTTGGCACAGCATGGTGGCTTCTCACGACTGTTCCAAACATCTGTGATCAAGCAAAATTGCCAGCTAGTAGTCCATGGCAATGCCCTGGTGACGATGTGTTTTACAATGCTTCAATCATATGGGGAGTGGTGGGTCCACAGAGAATGTTTACCAAGGATGGCATTTACCCTGGGCTGAATTGGTTTTTCCTCATTGGTGCACTTCTTCCTGTTCCAGTGTGGATATTGGCTCGCAAATACCCCAACCTCAAGTGGATTAAACTCATCAACATGCCCATCATCATTGCTGGTGCTGGGGGTATTCCTCCAGCCAGAACAGTGAACTACATAACCTGGGGAATTGTTGGAGTCTTCTTCAATTTCTACGTTTACAATAAGTTCAAGGCATGGTGGGCTCGCCACACCTACATTCTCTCAGCTGCATTAGATGCTGGACTTGCTTTCATGGGTGTTGTTCTCTACTTCGCCCTCCAAAGTTATGATATTTTAGGGCCAACCTGGTGGGGTGGCGAAGCTGACCACTGCCCTTTGGCCAAATGCCCCACAGCTCCAGGCGTAATCGCTGCTGGATGCCCTACTCTCTGA 2340 0.4556 MTPTMTDFSCLNQETSEGREREREEELLTLSSAMAEVVDNLHHSKLSMPEESEEVDDSPIEQVRLTVPITDDPTQPVLTFRTWTLGLASCIILAFINQFFGYRTTPLSVSSVSAQIISLPLGKLMAATLPTKAYLFPFTKWSFSLNPGPFNMKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPMAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVSSFAYYIIPGYLFQGLATISFVCLVWKNSIIAQQIGSGISGLGIGSFGLDWNTVAGFLGSPLAVPGFAIINVLVGFVLFMYVLIPISYWNNVYDAKKFPIISSKTFDSTGAKYNVSRILNAAYFDIDMDNYNNYSKLYLSVTFAFVYGLSFATLTATISHVVLFHGKMIVRMWKKTTSALKEKELGDVHTRIMKKNYEEVPEWWFVSILLLMIVVALITCEGFGKQLQLPWWGVLMSLAIALVFTLPIGVIQATTNMQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALAFLGDFKLGHYMKIPPKSMFIVQLVGTVVASGVYFGTAWWLLTTVPNICDQAKLPASSPWQCPGDDVFYNASIIWGVVGPQRMFTKDGIYPGLNWFFLIGALLPVPVWILARKYPNLKWIKLINMPIIIAGAGGIPPARTVNYITWGIVGVFFNFYVYNKFKAWWARHTYILSAALDAGLAFMGVVLYFALQSYDILGPTWWGGEADHCPLAKCPTAPGVIAAGCPTL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00995 779 Pfam OPT oligopeptide transporter protein 78 741 IPR004813 GO:0035673
Spst8g00995 779 NCBIfam small oligopeptide transporter, OPT family 56 745 IPR004648 GO:0055085
Spst8g00995 779 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g00995 779 PANTHER ISP4 LIKE PROTEIN 50 777 IPR004648 GO:0055085
Spst8g00995 779 NCBIfam OPT family oligopeptide transporter 62 743 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00995 Spst-Chr8 8659752 8663725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00995 39 779 Organic Solute Cotransporters AT5G55930 68.054 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00995 - - gmx:100776230 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00995 8 8659752 8663725 Spst8g00995 8 8659752 8663725 ECH