Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00990 ATGGGTTCGGTTGAAGTGAAAATGCGAAATGCGTGCCACAAAAACAAGACAACTTCATCGGAAAGTAGAGAGAGAATGGGAGAAGAAGAGTCCCGTGTTAGGTTGTTTGAGACAAAGGAAGGAAGATTCCGAGGAGTGTACAAGGTATTTGCATCCACAATATTTGCTGCTATTTGTCTGATTTGGGTGTATAGAGTGGGAAGCATGGGGGAAGTTAGAAGAGGAAGGTGGGCATGGATGAGTGCTATGGTTTCAGAGTTTGGATTTGGATTGTATTGGATCATCACTCAGTCTGTTCGGTGGAGAATAGTCTATCAGACACCTTTCAAGCACAGGCTCTCCCACAGATACGACGAGGAGAATCTACCAGAAGTAGACATTTTTGTGTGCACTGCCGATCCAAAACTGGAGCCTCCATGCATGGTGATTAACACGGTGTTATCAGCAATGGCATACAATTATCCTGCAAATAAATTGAACGTGTATCTCTCTGATGATGGAGGGTCTGAGTTAACATTCTATGCTCTCTTAAAGGCCTCCATTTTCTCCAAACATTGGTTACCTTTTTGTAGAAGATTCAATGTTGAACCTAGGTCCCCAGAGGTATTCTTTGCTCAAAATTGTAGCAGCAGCCCTACCACTAAGTATGGCAAAGCATGCTTATTTATCAAGAAATTATACGAAGAAATGAAAGGTGAGATTGAATCAGCCGCAGCAAGTGGAAAGCTTCCAGAGAATGTGAGGAATCAGCACAGAGGATTCTCAGAATGGAATCCAAAAACAACAAAGCAGGATCACCAGCCTATCGTGCAGATTATAGTCGATGGAAGGGACAGAAATGCTGTAGATGAAGATGGAGTTCAACTTCCAACAGTGGTTTACATGGCACGTGAGAAACGACCCAACCACCCTCATCACTTCAAAGCTGGAGCTATCAATGCACTGATAAGAGTGTCATCCGAAATAAGCAACGCCCCTTTCATCCTCAACTTGGACTGTGATATGTACTCCAATAATGCAGATACAATTCAAGAAATACTGTGTTTTTTCCTCGATGAAACAAAAGGTGAAGATATAGCTTATGTACAATTTCCACAAAGCTATAATAACATCACCAAGAATGACCATTATGCAAATTCTTATCTCGTAAGCGGTAAGGTTGAGTTGGCTGGCATATGCGGATATGGAGCAGCCTTGTTCTGTGGAACTGGATGCTTACATAGAAGAGAAAGTCTTTCAGGATCTTACTTAAGAGATTACAGAGTAAAACGGGACATGAAGCCTAAAAGAAACGATAACAGAACAATTGATGAAGTGAATGAAGCGTCGAAGGCTCTTGCCACTTGCACCTATGAGGAGGGCACGCAATGGGGGAAGGAGATGGGATTAGTATATGGTATTCCAGTAGAAGACATTGCGACTGGCCTTGTAATCTCGTGTAAGGGTTGGAAATCTATTTATTACAACCCAGAAAGGAAGGCATTCGTGGGCACGGCTCCAACAACCTTGGATGTAGCCTGTCTTCAGCATACGAGGTGGTCAGAAGGCATGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCGTGGGAAGATACACTTGGGTGTACAAATGGGATACTGCAATTACCTCTTGTGGGCTCCAATGTCACTGCCTACTCTTTGTTACGCCATTGTTCTTCCTATTTGCTTGCTTCATGGCATTCCATTGTTCCCTCAGCTCTCAAGCACATGGGTGCTTCCATTTGCGTATGCATTTCTTGCAACCTATGGCTATAGCTTGTGTGAGTATTTGAATTGTGGATCCACGACAAAGGGTTGGTGGAATTTGCAAAGAATAAAATTCCTCCATAGAATCACCTCTTATCTCTTTGGTTTCATTGACACTATGACCAAGCAATTAGGACTGTCACAGACAAACTTTGTCGTCACAGATAAAGTGGTTACTGAGGATGTTTGGAAGAGATATGAGCAAGAAATCATTGAGTTTGGGGGCTCTTCAATCATGTTGACCATATTATCAACAGTGGCTTTGCTAAACCTTTTTGGTCTGGTTGGAGGAATCAAGAGGGTTCTAATGGATTTGGAATTCAGTTCAAGCCAATTCATGGTGCAGATCACAGTGAGTTTATTGGTGGTAATGATCAATTTACCTACATATGAGGCACTGTTCATTCGTAGTGATAAAGGCTGCATATCATCCTCCATTATGCTCAAGTCCATTGTCTTGGCTTCATTAGCATGCTACCTAGCATCTTTCATTTGCTAG 2277 0.4238 MGSVEVKMRNACHKNKTTSSESRERMGEEESRVRLFETKEGRFRGVYKVFASTIFAAICLIWVYRVGSMGEVRRGRWAWMSAMVSEFGFGLYWIITQSVRWRIVYQTPFKHRLSHRYDEENLPEVDIFVCTADPKLEPPCMVINTVLSAMAYNYPANKLNVYLSDDGGSELTFYALLKASIFSKHWLPFCRRFNVEPRSPEVFFAQNCSSSPTTKYGKACLFIKKLYEEMKGEIESAAASGKLPENVRNQHRGFSEWNPKTTKQDHQPIVQIIVDGRDRNAVDEDGVQLPTVVYMAREKRPNHPHHFKAGAINALIRVSSEISNAPFILNLDCDMYSNNADTIQEILCFFLDETKGEDIAYVQFPQSYNNITKNDHYANSYLVSGKVELAGICGYGAALFCGTGCLHRRESLSGSYLRDYRVKRDMKPKRNDNRTIDEVNEASKALATCTYEEGTQWGKEMGLVYGIPVEDIATGLVISCKGWKSIYYNPERKAFVGTAPTTLDVACLQHTRWSEGMFQVFFSKYCPFIYGRGKIHLGVQMGYCNYLLWAPMSLPTLCYAIVLPICLLHGIPLFPQLSSTWVLPFAYAFLATYGYSLCEYLNCGSTTKGWWNLQRIKFLHRITSYLFGFIDTMTKQLGLSQTNFVVTDKVVTEDVWKRYEQEIIEFGGSSIMLTILSTVALLNLFGLVGGIKRVLMDLEFSSSQFMVQITVSLLVVMINLPTYEALFIRSDKGCISSSIMLKSIVLASLACYLASFIC 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00990 758 FunFam Cellulose synthase isolog 114 212 - -
Spst8g00990 758 MobiDBLite consensus disorder prediction 1 26 - -
Spst8g00990 758 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 260 417 IPR029044 -
Spst8g00990 758 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 113 217 IPR029044 -
Spst8g00990 758 SUPERFAMILY Nucleotide-diphospho-sugar transferases 272 525 IPR029044 -
Spst8g00990 758 MobiDBLite consensus disorder prediction 9 26 - -
Spst8g00990 758 Pfam Cellulose synthase 125 414 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst8g00990 758 Pfam Cellulose synthase 437 751 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst8g00990 758 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 39 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00990 Spst-Chr8 8617946 8626143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00990 18 757 Glycosyltransferase AT1G55850 47.185 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00990 - - gmx:100816849 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00990 8 8617946 8626143 Spst8g00990 8 8617946 8626143 ECH