Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00972 ATGGAGGGAAAGAGGACGAGGTTCCCATCGGAGTCACAGCCACAGAGCGTGATTCTTCTCGCGAAAATTAAAGAATTCACTCGAGCTCTGCTTGCAGACCTCACCAACGGACGCTCACCGCTCATTCTCATTTATCGCTTCAGAAGCTACTGCGCTGTTCCCAACGCCAACTGCTTTTGTGCCTCCGATTTGCCGTCCGGAAAGGAAGTTCTCACACTCCGCAGGAAATCCCACGCGCACAGACTAGTTGTCATGTTGAGAGTGATGCTGGTTGTTCAGAAACTTCTGCAAGAGAACAAGCATAGTTCTAAGAGAGACATTTATTACACGTATCCTTCTCTATTTTTAGATCAGTCAGTGGTGGACCAAGCAATTAATGACATATGTATTCTTATGCAGTGCAGTCGCCATAACCTCAATGTGGTTTCCGCCGGGAAGGGGTTAATTATGGGCTGGATAAGATTCTCTGAAGGAGAAAGGATATTTGACTGCATAAGTTCTCCCAACACTGCCCACCTCGTTCCTGTTCATGTTGAAGAAGTTCAAGATTGGGGAGAAACATTGCCTAACTTGTGCATAGATATCATTAGTGTTGCTCGATACATATTAGTGGTGGAGAAAGAATCAGAAACGTACTTGCTTGGCCTTTCTTTGATTTTATGCATTTTGTATACAAAAAGGTTTTTGCGGCTTCTGGTGGAGAATTTACGCCTGCCTGTTTATTGCTTGGTTGATTGTGATCCCCATGGGTTTGACATCCTCACCACTTACAGATTTGGTTCTATGCAAATGGCTTATGACACGAAACATCTTCGTGTCCCAGACATACACTGGCTTGGAGCTTTTCCTTCGGATTCTGAGAGATATTTTGTTCCAAACCAGTGTCTCCTTCCTTTGACTGCTGAAGTGCTCTTAATATTCCTTCTAGACAAAAGAAAAGTTGAAGCCATGTTACTTAGATGCTACCTTCAAAGGGAGGTACCACAATGGAGGTTGGAGCTAAAGCTGATGCTGCAAAAAGGAGTGAAGTTTGAGATTGAAGCCTTGTCTGTGCACGCACTTTCATTCTTGTCAGAATCTTACATACCATCTAAAATTGAAAGTGAGGTTTCTCGCCGTCTAAGACCATATTTCACCTGGTCTTCTGCTCCTCGCACAGATATCAAGAGGATGAACAACAGAGAATCCAGACTCGTCGTAACATGGCTTAACGAGTTTGACTTTGTGAAGGATCCAGAAAGAAGTTATTAG 1251 0.4373 MEGKRTRFPSESQPQSVILLAKIKEFTRALLADLTNGRSPLILIYRFRSYCAVPNANCFCASDLPSGKEVLTLRRKSHAHRLVVMLRVMLVVQKLLQENKHSSKRDIYYTYPSLFLDQSVVDQAINDICILMQCSRHNLNVVSAGKGLIMGWIRFSEGERIFDCISSPNTAHLVPVHVEEVQDWGETLPNLCIDIISVARYILVVEKESETYLLGLSLILCILYTKRFLRLLVENLRLPVYCLVDCDPHGFDILTTYRFGSMQMAYDTKHLRVPDIHWLGAFPSDSERYFVPNQCLLPLTAEVLLIFLLDKRKVEAMLLRCYLQREVPQWRLELKLMLQKGVKFEIEALSVHALSFLSESYIPSKIESEVSRRLRPYFTWSSAPRTDIKRMNNRESRLVVTWLNEFDFVKDPERSY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00972 416 Gene3D - 10 144 IPR036388 -
Spst8g00972 416 PRINTS SPO11 homologue signature 285 309 IPR013048 GO:0003677|GO:0003918|GO:0042138
Spst8g00972 416 PRINTS SPO11 homologue signature 250 269 IPR013048 GO:0003677|GO:0003918|GO:0042138
Spst8g00972 416 PRINTS SPO11 homologue signature 110 130 IPR013048 GO:0003677|GO:0003918|GO:0042138
Spst8g00972 416 Gene3D - 145 370 - -
Spst8g00972 416 SUPERFAMILY DNA topoisomerase IV, alpha subunit 79 368 IPR036078 GO:0003677|GO:0005694
Spst8g00972 416 CDD TOPRIM_TopoIIB_SPO 200 356 IPR034136 -
Spst8g00972 416 PRINTS DNA topoisomerase VI subunit A family signature 136 151 IPR002815 GO:0003677|GO:0003918|GO:0005694
Spst8g00972 416 PRINTS DNA topoisomerase VI subunit A family signature 245 261 IPR002815 GO:0003677|GO:0003918|GO:0005694
Spst8g00972 416 PRINTS DNA topoisomerase VI subunit A family signature 104 115 IPR002815 GO:0003677|GO:0003918|GO:0005694
Spst8g00972 416 PRINTS DNA topoisomerase VI subunit A family signature 118 135 IPR002815 GO:0003677|GO:0003918|GO:0005694
Spst8g00972 416 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 19 368 IPR002815 GO:0003677|GO:0003918|GO:0005694
Spst8g00972 416 Pfam Type IIB DNA topoisomerase 81 141 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00972 Spst-Chr8 8518762 8525752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00972 K10878 - gmx:100813920 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00972 8 8518762 8525752 Spst8g00972 8 8518762 8525752 ECH