Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00954 ATGGCACTCGAATCTTGGGCCCTGAGTCACCAAGTCTTCAACCCCAGTTCCAGATTGTTTTACCCCGCGCATGTAAATCGGCAAAAGAGCATACCAATCAAAGTTTTGGGTAGAAACACTACATATCCATTTCCCTTTGTTTCCAATTGTTTTGGTCCATCCACTTTTTCAACCCTTCAGGTTTCAAGTTTTGGGGCAGATGCCAAGATACTAGATAGAACTCGGTTGAGATGTTTAGGTGGTGGCAGTGATTGTTTGAGTGAGAGAAATGCTGTTTCCGAAACCAATTTGAACCTTATACATGAATTGTTGAAGACGGGAATAATCCTAGCTGCAACTGTTTGTGGTATTTTGGTGTTTGGATGTCCACGAGTTTTTGCTGTTGAAGGTGTTGTGAATGCAGGATATGATGTTATTGGACAGAGCATACTTTTGCTTAGGAATACTTGGCCCAAAGTGTTGCAAGTTCTTCGTATATTTAAGGAGCAAGGTTTGGTGTTGGCAGTGCTTTTGGGCCTTTCAGCCTTTTTCTCTATGGCAGAAACTTCAATCACCACACTTTGGCCTTGGAAGGTTCGAGAGTTGGCCGAAAAGGAGTCTGAAAATGGCGTTTTCAGACTACTCCGAAGTGATGTTACTCGGTTCCTTACAACAATACTTATTGGCACAACGGTTGTCAATATTGGAGCAACTGCTCTGGTCACTGAAGCAGCAACTGCTATGTTTGGTGAGGCAGGTGTTAGCGCAGCAACAGGAGTGATGACTTCAGATCTATTCTATCAGATTGATCACAGAACAGTTCATGTGGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATAGCTGTTCATAATGCCACAGAGGTAGCTCGTTTTGTGGCCAGTGGCATGGCTTTCCCTGGTGTTGTATCCTGTAGGAAGAATTGTTACTTATCTTTCAATGGGGATGCTGAAATTGCTTGGCCTAAAAGGAAGAAGGGCATCTGTGGTTTGCCTACTTTTGAGCCATATGTAACAGAAGATGAACTAAAATTGATGCTAAGAGGTGCAGAGTTAAGTGGGGCAATAGAGGAGGAAGAACAGGATATGATTGAAAATGTTCTAGAGATAAAAGACACACATGTCAGAGAGGTTATGACACCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTGGTTGACTTTCATCACTTGTGGGTCACACATCAATACTCAAGGGTGCCTGTTTTTGAGCAACGCGTTGATAATATAATGGGTATAGCATATGCAATGGATCTGCTGGACTATGTACAAAAGGGGGAGTTGCTTGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCTTATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCAGTTGTTCTTAACGAGTATGGTGGAACTGTGGGGATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATATTTGATGAAAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGTTACATAGTAATGCGAGCTGAGGGTGTTTTTGATGTGGATGCAAACACATCTATTGATCAGCTCTCAGAAGATTTGAACATAAAAATGCCAGAGGGTCATCAATATGAGACAGTATCAGGTTTTGTGTGTGAGGCATTTGGATACATTCCAAGGACAGGTGAGTGCATCAAAGTAGTTCTTGAAAGGGAAGATGAAGATGATAACAATGAGACCAGTGCTGACCAGCAGGATCAGAAGGAGAAGAACCAGATTTTCAAACTTGAGATACTAGCTGGAAATGCCAGAAAGGTAAGCGCTGTTCGGTTTGAACGAATAAATAATGGTGATGAGAATTTGGAGACTAAAGTTACTCGCATGGTCCCCAAAATCATGAAAAGAAAATGGAGCAGTGGTCAGAACTCGGAGGATGATACAGAATATGACGGAGATACATTTGAAAAGAGACCACAGGATGACATTTCTAGTGAATATTTAGTTGATCATGAAAATTCTAGTAGAGAATAA 2058 0.4135 MALESWALSHQVFNPSSRLFYPAHVNRQKSIPIKVLGRNTTYPFPFVSNCFGPSTFSTLQVSSFGADAKILDRTRLRCLGGGSDCLSERNAVSETNLNLIHELLKTGIILAATVCGILVFGCPRVFAVEGVVNAGYDVIGQSILLLRNTWPKVLQVLRIFKEQGLVLAVLLGLSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGVSAATGVMTSDLFYQIDHRTVHVVAILLLTEITPKSIAVHNATEVARFVASGMAFPGVVSCRKNCYLSFNGDAEIAWPKRKKGICGLPTFEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREDEDDNNETSADQQDQKEKNQIFKLEILAGNARKVSAVRFERINNGDENLETKVTRMVPKIMKRKWSSGQNSEDDTEYDGDTFEKRPQDDISSEYLVDHENSSRE 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00954 685 Pfam Transporter associated domain 522 623 IPR005170 -
Spst8g00954 685 FunFam Magnesium/cobalt efflux protein CorC 358 508 - -
Spst8g00954 685 SUPERFAMILY CBS-domain pair 364 503 IPR046342 -
Spst8g00954 685 CDD CBS_pair_CorC_HlyC_assoc 376 497 IPR044751 -
Spst8g00954 685 Pfam CBS domain 445 500 IPR000644 -
Spst8g00954 685 Pfam CBS domain 377 435 IPR000644 -
Spst8g00954 685 ProSiteProfiles CNNM transmembrane domain profile. 156 362 IPR002550 -
Spst8g00954 685 MobiDBLite consensus disorder prediction 659 685 - -
Spst8g00954 685 Gene3D - 518 620 IPR016169 -
Spst8g00954 685 ProSiteProfiles CBS domain profile. 381 442 IPR000644 -
Spst8g00954 685 SMART CorC_HlyC_2 521 624 IPR005170 -
Spst8g00954 685 MobiDBLite consensus disorder prediction 642 685 - -
Spst8g00954 685 PANTHER HEMOLYSIN-RELATED 158 646 - -
Spst8g00954 685 ProSiteProfiles CBS domain profile. 448 506 IPR000644 -
Spst8g00954 685 SUPERFAMILY FAD-binding/transporter-associated domain-like 519 628 IPR036318 GO:0050660
Spst8g00954 685 Pfam Cyclin M transmembrane N-terminal domain 166 362 IPR002550 -
Spst8g00954 685 Gene3D - 356 511 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00954 - - gmx:100778907 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00954 8 8401160 8408698 Spst8g00954 8 8401160 8408698 ECH