Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00936 ATGGGACTGGTGCTTATGTTTACCATCTTTGGTAGACTTGCATCTGTCACAGGACATATCCGTGCAATCTCATCACAAACCTTGGAGTATCTATATTTGTGCAACATCAAGCTACAGGGCAATATTCCACAATCATTTTTCACCCTTGTAAACCTAACTGAAATATGTCTATCATCAAACAATTTCAGTGGTTTTTTCTTCACCGATGGCAATTACGATTTCTCTCGCTTAGAGAGATTGTATTTATCTTCCATGGGTTTAACTGAATTTCCAAAATTATCAGGAAAAGTGCCAAATTCGATAGATCTAGATCTGTCCAACAACAAATTCAATGGAACAGTGCCCGAATGGTTGCATGAAATGGTTTCGCTACAAAGTTTGTATTTATCCCAAAACTTGTTGATTGGTGGCATCTCTTCCTCGATATGCAACGCAAGTTCAATGGAGTTCTCAACTTTTTTGCGAGCCAATAAGTTGCACGGTCCCATTGTAAATTTGGAAACCGAACATCAATTTCCCAGTTTGATTGTTTTTGATATCTCATCCAACAACTTCAACGGCTTACCAAAAGCCTACATACAAAATTTTGAAGCTATGAAGAATGTCATTCAAGAAGTGGAGAACCGTCTTCAGGAATACATTGACATTGGTAATTCAACAGGCATTGATTCTATAATTGATCATGAGATTGTTTCTGCGACTTTAACTACAAAAGCAATGAGTATGACCTTCAACCAAATTCCAATCAACTTGGTAGCCATTGATTTATCCAGTAACAAATTTGAAGGAGAGATTCCAACTGTCATTAGAGAGCTTAACGCACTCAAAGCGCTTAATCTTTCCCATACAGACTCAGTGGTCCAATACCGGAATCCATGA 879 0.3788 MGLVLMFTIFGRLASVTGHIRAISSQTLEYLYLCNIKLQGNIPQSFFTLVNLTEICLSSNNFSGFFFTDGNYDFSRLERLYLSSMGLTEFPKLSGKVPNSIDLDLSNNKFNGTVPEWLHEMVSLQSLYLSQNLLIGGISSSICNASSMEFSTFLRANKLHGPIVNLETEHQFPSLIVFDISSNNFNGLPKAYIQNFEAMKNVIQEVENRLQEYIDIGNSTGIDSIIDHEIVSATLTTKAMSMTFNQIPINLVAIDLSSNKFEGEIPTVIRELNALKALNLSHTDSVVQYRNP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00936 292 Pfam Leucine rich repeat 75 134 IPR001611 GO:0005515
Spst8g00936 292 Coils Coil 196 216 - -
Spst8g00936 292 Gene3D Ribonuclease Inhibitor 11 286 IPR032675 -
Spst8g00936 292 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 153 283 IPR046956 -
Spst8g00936 292 SUPERFAMILY L domain-like 24 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00936 Spst-Chr8 8278977 8280135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00936 28 269 Receptor kinase-like Gene Family AT3G11080 28.904 1.53e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00936 - - var:108336203 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00936 8 8278977 8280135 Spst8g00936 8 8278977 8280135 ECH