Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00935 ATGTCTAAATTCGAAGGTGTTATTGTCTCCGATCAATCGCTTCAAAGCCAATTCACGCAGGTTGAGCTTCGCAGCCTGAAATCAAAATTTGTCACTTTAAAGAATCAGAATGGTAAAGTTACATTTGGAGATTTGCCACCTTTGATGGTGAAGCTAAACGCATTCAGAGACACGTACGGTGAGGATGAGATTAGGGGGATCTTGGTTGAATCAGGCGCTGATTTTACCAACGACATTGATTTTGAAACCTTCTTAAAGACATATTTGAATTTGCAAACCCAAGCTACTGCAAAACCAGGTGGTAGAAGGCACTCCTCCTCATTTCTCAAGGAAACCGTGACCACCCTTCTTCACACAATCGGTGAATCGGAAAAGTCCTGTTATGTTGCCCACATAAACAGCTATCTTAGCGATGATCCATTTTTGAAGCAATATCTTCCATTGAACCCAGCTGCAAATGATATATATGATCTTGCAAAAGATGGCGTTCTTCTGTGTAAGCTTATCAATGTTGCTGTGCCTGGGACTATAGATGAGCGAGCCATCAATTGCAAACGAAATCCTAGTCTTTGGGAGGTCAACGAGAACCATACTCTATGCCTCAATTCTGCCAAGGCTATTGGCTGCACTGTGGTTAACATTGGTGCACAGGACTTAGTTGAAGGAAGACCTCATCTTGTTCTAGGGTTAATTTCCCAAATCATAAAGATTCAGCTGCTGGCAGATCTCAACCTCAAGAAGACACCTCAACTTCTGGAATTGGTTGATGAAAACGATGAGATTGAAGAGCTTCTTAATTTGTCTCCTGAAAAGGTTCTACTAAAATGGATGAATTTTCATCTCCGGAGAGCAGGATATGAAAAAACCGTCAGAAATTTTTCTTCGGATGTTAAGGATGGAGAGGCTTATGCTTATCTGCTTAATGTCCTTGCTCCGGAACATTGCAATCCAGCCACCTTAGATACCAAGGATGCCTATGAAAGGGCAAGTCTGGTTATTGATCATGCGGAGAGAATGGGCTGCAAAAGATACTTGACCCCGAGGGATATTGTAGAGGGAACTTCAAATTTGAATCTTGCATTTGTTGCACAATTGTTTCATCACCGGAGTGGTCTATCTACAGACACTAAAAAGATTTCCTATGCTGAGATGATAACAGATGATGTGCAAACATGTAGAGAAGAGAGATGCTTCCGAATGTGGATCAATAGTTTTGGAATTTCTACACATGTAAATAATCTATTTGAGGATGTGAGAAATGGATGGGTACTTTTAGAATTGTTAGACAAGATTTTTCCAGGATCAGTTAACTGGAAACAGGCAACAAGACCTCCAATAAGAATGCCATTCAGAAAAGTAGAGAACTGCAATCAAGTCATAGAAGTTGGTACACAACTGAGATTCTCGCTTGTCAACGTAGCTGGCAATGACATCGTGCAAGGAAATAAGAAGCTCATTCTTGCTTTATTGTGGCAGCTGATGAGATTCACTATGCTTCAATTGTTGAAAAATTTGAGATCTCATTCCCAAGGAAAGGAGATCAGAGATGCAGATATCCTGAAATGGGTAAACAGAACAGTGAAGAACACTGGCAGAACTTCTCACATAGAGAGCTTCAAGGATAAGAGCTTGTCAAGTGGACTCTTTTTCCTTGAGCTTCTTAGTGCTGTTGAGCCCAGGGTTGTCAATTGGAACCTTGTCACCAAGGGTGTAAGTGATGATGAGAAGAGGTTGAATGCGACCTATACAATCAGTGTTGCAAGAAAGCTGGGTTGTTCCATATTTTTGTTACCTGAGGATATTATGGAGGTTAATCAGAAGATGATTCTCACTCTTGCAGCCAGTATAATGTATTGGAGCCTGCAACAACAGCCTGAAGATCCAGATTCAATTCCTTCACCTGCGGCTACCACCATGTCTGACGCATCCCCAGTACCTTCGGTTTGTGGGGAAGATGAAAGTTTCTCCATCGGCATCGAATTCTCCAACCTCAGTGTTGATGATGCCACCTCCGACACCACTGCCTCCTCACAACCGGAGTCTGATGTTGTTTCTGCAGCAGATGAGCTGTTATGA 2076 0.42 MSKFEGVIVSDQSLQSQFTQVELRSLKSKFVTLKNQNGKVTFGDLPPLMVKLNAFRDTYGEDEIRGILVESGADFTNDIDFETFLKTYLNLQTQATAKPGGRRHSSSFLKETVTTLLHTIGESEKSCYVAHINSYLSDDPFLKQYLPLNPAANDIYDLAKDGVLLCKLINVAVPGTIDERAINCKRNPSLWEVNENHTLCLNSAKAIGCTVVNIGAQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLLELVDENDEIEELLNLSPEKVLLKWMNFHLRRAGYEKTVRNFSSDVKDGEAYAYLLNVLAPEHCNPATLDTKDAYERASLVIDHAERMGCKRYLTPRDIVEGTSNLNLAFVAQLFHHRSGLSTDTKKISYAEMITDDVQTCREERCFRMWINSFGISTHVNNLFEDVRNGWVLLELLDKIFPGSVNWKQATRPPIRMPFRKVENCNQVIEVGTQLRFSLVNVAGNDIVQGNKKLILALLWQLMRFTMLQLLKNLRSHSQGKEIRDADILKWVNRTVKNTGRTSHIESFKDKSLSSGLFFLELLSAVEPRVVNWNLVTKGVSDDEKRLNATYTISVARKLGCSIFLLPEDIMEVNQKMILTLAASIMYWSLQQQPEDPDSIPSPAATTMSDASPVPSVCGEDESFSIGIEFSNLSVDDATSDTTASSQPESDVVSAADELL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00935 691 Gene3D - 245 373 IPR036872 -
Spst8g00935 691 FunFam Fimbrin-2 like 388 505 - -
Spst8g00935 691 PANTHER FIMBRIN/PLASTIN 1 623 IPR039959 GO:0051015|GO:0051017
Spst8g00935 691 FunFam Fimbrin-1 isoform A 506 618 - -
Spst8g00935 691 MobiDBLite consensus disorder prediction 668 683 - -
Spst8g00935 691 ProSiteProfiles Calponin homology (CH) domain profile. 513 621 IPR001715 GO:0005515
Spst8g00935 691 Pfam Calponin homology (CH) domain 268 369 IPR001715 GO:0005515
Spst8g00935 691 Pfam Calponin homology (CH) domain 152 237 IPR001715 GO:0005515
Spst8g00935 691 Pfam Calponin homology (CH) domain 515 617 IPR001715 GO:0005515
Spst8g00935 691 Pfam Calponin homology (CH) domain 395 496 IPR001715 GO:0005515
Spst8g00935 691 ProSiteProfiles Calponin homology (CH) domain profile. 267 370 IPR001715 GO:0005515
Spst8g00935 691 ProSiteProfiles Calponin homology (CH) domain profile. 392 498 IPR001715 GO:0005515
Spst8g00935 691 MobiDBLite consensus disorder prediction 625 644 - -
Spst8g00935 691 SUPERFAMILY Calponin-homology domain, CH-domain 121 618 IPR036872 -
Spst8g00935 691 SUPERFAMILY EF-hand 13 95 IPR011992 -
Spst8g00935 691 MobiDBLite consensus disorder prediction 668 691 - -
Spst8g00935 691 CDD CH_AtFIM_like_rpt2 259 367 - -
Spst8g00935 691 SMART ch_5 515 619 IPR001715 GO:0005515
Spst8g00935 691 SMART ch_5 269 368 IPR001715 GO:0005515
Spst8g00935 691 SMART ch_5 394 496 IPR001715 GO:0005515
Spst8g00935 691 SMART ch_5 124 237 IPR001715 GO:0005515
Spst8g00935 691 ProSitePatterns Actinin-type actin-binding domain signature 2. 470 494 IPR001589 -
Spst8g00935 691 FunFam Fimbrin-2 isoform A 245 373 - -
Spst8g00935 691 FunFam Fimbrin-2 like 118 244 - -
Spst8g00935 691 Gene3D - 506 618 IPR036872 -
Spst8g00935 691 CDD CH_AtFIM_like_rpt3 390 503 - -
Spst8g00935 691 Gene3D - 388 505 IPR036872 -
Spst8g00935 691 ProSitePatterns Actinin-type actin-binding domain signature 2. 211 235 IPR001589 -
Spst8g00935 691 MobiDBLite consensus disorder prediction 625 651 - -
Spst8g00935 691 Gene3D - 119 244 IPR036872 -
Spst8g00935 691 ProSiteProfiles Calponin homology (CH) domain profile. 122 239 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00935 Spst-Chr8 8271593 8276718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00935 1 685 EF-hand Containing Proteins AT5G55400 67.188 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00935 K17275 - gmx:100794850 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00935 8 8271593 8276718 Spst8g00935 8 8271593 8276718 ECH