Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00924 ATGGCGAATGAAAACGAACCAGCGAAGCTGCTGTTACCATATCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCCCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAAGCGAGCGCACAAAGACCACTAATGCTCTTCTCATCTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCCATCCAGTTAGGGCCTGAGGACAATTTATATCTTGAGGGTTTTGCTTTGAATGTGTTTGGAAAGGCAGACAAGCAAGATCGTGCTGGAAGAGCAGATTTGAATACGGCTAAAACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGTGCAGTTCAACCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGAAAGCCCACAGCTGGTCCCCCTGATGGTGATGAGGATCTGTCAATTCCATTCAGCTCTTCAAGTGATAGATATGAACTTGGGACTAATGAAACTACTGTTTCCAGCCACGGACTTGAATCTGATTCATCACCTAGTTATCATAACCCTGTCAACTACCAGAATACACAAGGCATTCATCCGGCTCCTAAATTTCATGATACTGTTAATGAACAACATTCTTCAAATAGTCCACCATCTGTACCATGTCATGATAGGGTAGATAACAACAAGCATTCTTCTGTTGTTTCTCCATCATCTCTCTCTTACACGCCTGGAGTTTATCCTTCCCAAGACTATCCTCCTCCTCCACCTTCACAAGATTATCATTCTCCGCCACATTCCCAAGAGTATCATCCTCCTCCACCTTCCCAAGACTATCATCCTCCACCACCTTCCCAAGACTATCATCCTCCACCACCTTCCCAAGATTATCATCCTCCTCCAACATCCCAAGATTACCATCCTCCTCCAACATCCCAAGATTACCATCCTCCACCTGCGAGGTCAGAAGGTTCTTATCCCGAGCTCTACAACCACCAGCTATACTCAAAGGAGAATTCACAGCATTTAGGGCCTAACTACCCTTCTCATGAAAATTCTTCTTATTCCTATCCCCATTTTCAGTCTTATCCAAGTTTTACAGAAAGCAGCCTTCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCGGATGCTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAGCCATTCATCAAGTGCCCAACATAGTTCCAGCAGCAGAAATGGAACTGTCGTGGAACCTAAATCAACTACTCAGACATACCAGTATAACAGTAACTACCAGCCAGCACCTGAAAAAATAGCGGAGGCACACAAGGCTGCAAGATTTGCTGTTGGAGCACTGGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCAGCTAGTTAG 1461 0.4381 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLISLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPTAGPPDGDEDLSIPFSSSSDRYELGTNETTVSSHGLESDSSPSYHNPVNYQNTQGIHPAPKFHDTVNEQHSSNSPPSVPCHDRVDNNKHSSVVSPSSLSYTPGVYPSQDYPPPPPSQDYHSPPHSQEYHPPPPSQDYHPPPPSQDYHPPPPSQDYHPPPTSQDYHPPPTSQDYHPPPARSEGSYPELYNHQLYSKENSQHLGPNYPSHENSSYSYPHFQSYPSFTESSLPSVPSNYTYYQGSDASYSSQSAPLTTSHSSSAQHSSSSRNGTVVEPKSTTQTYQYNSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00924 486 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 295 483 IPR044538 GO:0032511
Spst8g00924 486 MobiDBLite consensus disorder prediction 394 428 - -
Spst8g00924 486 MobiDBLite consensus disorder prediction 148 365 - -
Spst8g00924 486 MobiDBLite consensus disorder prediction 164 210 - -
Spst8g00924 486 MobiDBLite consensus disorder prediction 258 326 - -
Spst8g00924 486 MobiDBLite consensus disorder prediction 342 365 - -
Spst8g00924 486 Pfam Vta1 like 13 148 IPR039431 -
Spst8g00924 486 MobiDBLite consensus disorder prediction 217 232 - -
Spst8g00924 486 Gene3D - 4 152 IPR023175 -
Spst8g00924 486 MobiDBLite consensus disorder prediction 241 256 - -
Spst8g00924 486 Pfam Vta1 C-terminal domain 444 481 IPR041212 -
Spst8g00924 486 Gene3D Immunoglobulin FC, subunit C 443 482 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00924 1 118 Glycosyltransferase AT2G31960 25.984 1.47e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00924 K12199 - gmx:100783739 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00924 8 8201498 8203944 Spst8g00924 8 8201498 8203944 ECH