Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00921 ATGGAACTCTGCACTCGAACCTTCACAAGTTTCCTTCTTTTCAACCCTTCTTTCTCTTCAAACTCTCTTCTTCTCCGTGCTAATGCCAACGCTACACCGTTTAAATTCAATTCCCTTAAACTATCGTCTTTTTCGCCTCATATTCATCTCTTTCGGCCCTTTATCTCTCCTCACACTTCTTCTTCTTCCTTTACCGTCTCAGCTGCTTCTTCCTCTTCCTCAGTTGCAGTTGGCACAGAACAGGACCGTCTTCCAGCAGAACTGAAGGTCACTGAAACAGAGCAACCCAATTCCAGTGTTAGATTGCATGTAGAGGTGCCATCATTGGTATGTGAGGATTGTTACAAAAGGGTCATAGCAGAGTTTATGAAGCAAGCAAAGATCCCTGGATTTCGGCCGGGAAAGAAAGTTCCAGAAAGTATTCTTATTAGTTATGTTGGGAGTCAAAATGTTCAGAAGGCTACTATTGAATCTATATTAAGGAGGACACTTTCTCATGCTATGACATCGGTTACTGGAAAGGCTTTGCAGGACTCAGTACGTATAGTTACTAAGTTTTCTGAGATGGAGGAGACATATTCTTCTCTTGGGTCTCTTAGATATGATGTCATTGTTGATATTGCACCAGAAATCAAATGGATTCCTGATAATAATGCATTCAAAAATTTAAAGATTGTTGTTGAGATAGATAGCGATATAGATGCTCAAAGAGCATCTGAACAAGAATTTAGAAGGCGTTACAAGTCCATTGGTGCCCTGAAAGTGGTTACTGACAGAGGGCTACAGGTTGGTGATGTTGCTGTTATTGACATCTCAGCTACAACCATTGATCAAGATGAATCAAATATTAAAAATATTCCCTCTGCCGAAAGTAAAGGCTTTAATTTTGATACAGAAGACGGCGACAAAGTATTACCAGGTTTCCTTGATTCAATAATTGGAATTCACCGTGGTGAATCAAAGTCTTTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAAAGTCTTCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTTTTTTACAGAGATTTACCCGAACTTGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCACCACTCTGGAGCAGGTCAAAGACTTCTTGTTTCAGAGATGCCTAGAGGTGGAGCAAACAGCTAGAGAACAAGCAACTGATAATGCTATCTTAGATCAAATTTCTAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAATGAGCAACAGCTGGCATCTCTCTCAAGTCCAAAGGCTGTGAACCAATATCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAATCTGGCAGTGGGTGATATATATAGGCGCGAAAATCTGCAGTTTGCTACTGAGGACCTCGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAAACAAGAATATGATGAGGAACGGGTGAAGGATCAGGTTCAAGAAATACTAGAAGGAGCTAAAGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATATAACTAGATGA 1623 0.398 MELCTRTFTSFLLFNPSFSSNSLLLRANANATPFKFNSLKLSSFSPHIHLFRPFISPHTSSSSFTVSAASSSSSVAVGTEQDRLPAELKVTETEQPNSSVRLHVEVPSLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSQNVQKATIESILRRTLSHAMTSVTGKALQDSVRIVTKFSEMEETYSSLGSLRYDVIVDIAPEIKWIPDNNAFKNLKIVVEIDSDIDAQRASEQEFRRRYKSIGALKVVTDRGLQVGDVAVIDISATTIDQDESNIKNIPSAESKGFNFDTEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQESLRGVHAQFTVECKELFYRDLPELDDSIADKLLPGCTTLEQVKDFLFQRCLEVEQTAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGANLLEIQAKMKLNEQQLASLSSPKAVNQYLEHQKENITNLIKQNLAVGDIYRRENLQFATEDLVKEVENSIAEFKRQKQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYITR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00921 540 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 358 536 IPR027304 -
Spst8g00921 540 Hamap Trigger factor [tig]. 88 536 IPR005215 GO:0015031
Spst8g00921 540 Coils Coil 490 510 - -
Spst8g00921 540 FunFam Trigger factor 88 211 - -
Spst8g00921 540 FunFam Trigger factor 254 356 - -
Spst8g00921 540 Gene3D - 223 535 IPR037041 GO:0006457|GO:0015031
Spst8g00921 540 Pfam Bacterial trigger factor protein (TF) 89 229 IPR008881 GO:0006457|GO:0015031
Spst8g00921 540 SUPERFAMILY Trigger factor ribosome-binding domain 88 216 IPR036611 GO:0006457|GO:0015031
Spst8g00921 540 FunFam Chloroplast trigger factor 334 535 - -
Spst8g00921 540 Gene3D - 86 211 IPR036611 GO:0006457|GO:0015031
Spst8g00921 540 SUPERFAMILY FKBP-like 254 359 - -
Spst8g00921 540 Gene3D - 249 356 IPR046357 GO:0003755
Spst8g00921 540 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 47 522 IPR005215 GO:0015031
Spst8g00921 540 Pfam Bacterial trigger factor protein (TF) C-terminus 372 529 IPR008880 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00921 K03545 - gmx:100805543 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00921 8 8176905 8182359 Spst8g00921 8 8176905 8182359 ECH