Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00908 ATGGAGTTCGACCCGATCCCAGTCGGTTCGTGCTCCAAAGAACACCAGACGATCTACAAGGACTGGTTCAATTACGCTGATTCAGATAGCGATGGCCGCATTACGGGGAGTGATGCCACCAAGTTTTTCTCCATGTCCAATTTGTCTCGCGAAGATCTTAAGCAGGTGTGGGCTATTGCAGATTCAAAGCGGCAAGGATATCTTGGTTTCTCTGAATTTATCATTGCTATGCAGCTAGTTTCTTTGGTTCAATCTGGGCACTCAATAACACCTGATTTGCGGACTGGTGATGTTGATTTTACAGATCTACAACCTCCCATAATGGATGGTTTGGATGCATTACTAGTTAAGAAAAAGCATAAACATAAAGAGGTTGACACAAATGGTAGTTCTCAATTGCAACTATCACCATCAAGTAATTGGTTTTCTTCAAAATCAACAAAAAAGGTGCCTCTTTCCTCAGTGACATCAATAATTGACGGCTTGAAGACACTCTACCTTCAGAAGTTGAAGCCATTAGAAGCCACTTACCGTTTTAATGATTTTGTATCCCCATTACTGACAAATAGTGACTTTGATGCCAAACCTATGGTTATGCTTTTGGGTCAGTACTCAACTGGAGCGCATATTGGACCCGAGCCAACAACTGATAGATTTGTTGTTGTCATGTCCGGATCGGATGAGAGAACTGTTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGCCTTACAACTTTTGGCACAGCATTTTTGTCAAAATTTGTCTGTTCACAAATGCCTCATCCTCTACTGGAACACATCACATTTGTCGACACTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAACGAGCATATGATTTTACGGGTGTAACATCTTGGTTTGCTGCTAAGTGTGATTTGATACTCCTACTGTTTGATCCTCACAAACTTGACATCAGCGATGAGTTCAATCGTGTGATATCATCCTTACGGGGGCATGATGACAAAATCAGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACCCAACAATTGATGAGGGTGTATGGAGCCTTAATGTGGTCACTTGGGAAGGTGCTGAAGACACCTGAAGTAATGCGTGTGTATATTGGCTCCTTCAGCGACAAGCCTGTAAATGATGCTGCCACTGGTCCAATTGGTAAGGAACTCTTTGAAAAGGAACAGGATGATCTTCTTTCGGATCTGAAAGATATACCAAAGGCAGCTTGTGATCGAAGAATCAATGAGTTTGTCAAAAGAGCCCGGGCAGCCAAGATACATGCTTATATTATCAGTCATCTTAAAAAGGAGATGCCTGCTATGATAGGCAAATCTAAAGCTCAGCAAAAGCTCATTGATAATTTGGCAGCTGAATTTGGAAAGGTACAAAGGGAGTTCCATTTACCTCCTGGTGATTTCCCAAATGTAGAGTATTTCAGAGAGAGATTGAGTGGTTACAATATTGATAAGTTTGAAAAATTGAAACCAAAGATGATACAAGCAGTTGATGATATGTTAGCTTACGACATTCCTAACCTCTTGAAGAATTTTAGGAATCCCTATGATTAA 1587 0.414 MEFDPIPVGSCSKEHQTIYKDWFNYADSDSDGRITGSDATKFFSMSNLSREDLKQVWAIADSKRQGYLGFSEFIIAMQLVSLVQSGHSITPDLRTGDVDFTDLQPPIMDGLDALLVKKKHKHKEVDTNGSSQLQLSPSSNWFSSKSTKKVPLSSVTSIIDGLKTLYLQKLKPLEATYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGAHIGPEPTTDRFVVVMSGSDERTVPGNTVAVQADMPFSGLTTFGTAFLSKFVCSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLKTPEVMRVYIGSFSDKPVNDAATGPIGKELFEKEQDDLLSDLKDIPKAACDRRINEFVKRARAAKIHAYIISHLKKEMPAMIGKSKAQQKLIDNLAAEFGKVQREFHLPPGDFPNVEYFRERLSGYNIDKFEKLKPKMIQAVDDMLAYDIPNLLKNFRNPYD 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00908 528 Gene3D - 162 519 - -
Spst8g00908 528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
Spst8g00908 528 CDD EH 19 85 IPR000261 GO:0005515
Spst8g00908 528 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Spst8g00908 528 Gene3D - 198 411 IPR027417 -
Spst8g00908 528 SUPERFAMILY EF-hand 12 90 IPR011992 -
Spst8g00908 528 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 177 413 IPR030381 GO:0005525
Spst8g00908 528 Pfam Cytoskeletal-regulatory complex EF hand 18 81 IPR000261 GO:0005515
Spst8g00908 528 CDD EHD 197 426 - -
Spst8g00908 528 Gene3D - 10 108 - -
Spst8g00908 528 SMART eh_3 12 99 IPR000261 GO:0005515
Spst8g00908 528 PANTHER EH DOMAIN 14 525 - -
Spst8g00908 528 ProSiteProfiles EH domain profile. 15 91 IPR000261 GO:0005515
Spst8g00908 528 Pfam Domain of unknown function (DUF5600) 418 519 IPR040990 -
Spst8g00908 528 Pfam N-terminal EH-domain containing protein 161 193 IPR031692 -
Spst8g00908 528 FunFam EH domain-containing protein 1 194 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00908 Spst-Chr8 8009955 8015864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00908 1 528 EF-hand Containing Proteins AT3G20290 79.633 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00908 K12483 - gmx:100804468 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00908 8 8009955 8015864 Spst8g00908 8 8009955 8015864 ECH