Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00905 ATGCCCTGCTTCTCTCAGAATCAGAGCATGATGGCTCCTCTCGCATTCTCCTTCTTCTTCCTTCTTATCTCATTCTTTTCTTTCACATCAGAAGCAGGATCCGTAGGAATAAACTATGGACGGATTGCGAACGACCTACCTACCCCGGCGAAGGTGGTGGAGCTTCTGAAGAGTCAGGGGCTGAACCGTGTGAAACTATACGACACCGACTCCACCGTGTTAACGGCGTTCGCTAACTCAGGAATCAAGGTGGTGGTTGCGCTGCCAAACGAGCTTCTCTCCAACGCCGCCGCGGACCAGTCATTCACTGACGCATGGGTGAAAGCCAACATCTCAAACTACTACCCCGCCACGCAAATAGAAGCCATCGCGGTGGGCAATGAAGTCTTCGTGGACCCCAACAACACCACGAAGTTCCTCGTACCCGCCATGAAGAACGTGCACGCTTCCTTATCCAAGTACAACCTCGACACCAACATCAAAATCTCCTCACCCATCGCACTCTCCGCGCTCCAAACGTCCTTCCCCGTCTCATCCGGTTCATTCAAAACCGAACTCGTCGAACCGGTAATTAAACCCATGCTCGACCTCCTCCGCCAAACCGGTTCCTACCTCATGGTTAACGCGTACCCGTTCTTCGCTTACACAGCAAACGCTGATAAAATCTCCTTGGACTACGCGCTCTTCAAAGATAACCCCGGCGTGGTTGATTCCGGTAATGGTTTAAAATACACGAACCTTCTTGACGCCCAAATCGACGCCGTTTACGCTGCCATGACAGCGCTTCAATACAACGATGTTAAGATCACAGTTTCGGAGACGGGCTGGCCTTCCGCGGGGGACTCGAACGAAGTAGGAGCGAGCCCCGAGAATGCGGCGTCGTACAACGGGAACTTGGTTCGGCGCGTGTTGGGACAGAGTGGTACCCCCTTGAAGCCCAATGATTCACTCGACGTTTTTCTCTTCGCGCTTTTCAACGAGAACCAGAAAACGGGGCCCACGTCGGAGAGGAACTACGGGTTGTTTTATCCCAGCGAGAAGAAGGTTTATGATATTCCGTTGACGGCGGATGGGGTCAGTGACGCGCCGTCCTCTGGCGTGGGGAAGAGCCAGACTCCGGTGAGTGGGGACGTATCAACGACGTCCCATCAGGGTCAGACTTGGTGCGTGGCGAATGGCGGTTCTTCAGAGGAGAAGCTGCAGAACGGTCTTAACTACGCATGTGGAGAGGGTGGGGCTGATTGCACTCCGATTCAACCCGGTGCCACGTGTTACAATCCTAACACGTTGGAGGCCCATGCTTCTTACGCATTCAACAGTTACTATCAGAAGAAGGCACGTGGGGCTGGCACGTGCGATTTTGGTGGGACCGCTTATGTCGTTACCCAACCTCCCAGTAAGTATTACTATCATCAATTGTTGTTTGCTGTGTGTTTGGTGAATTTGTGTTGCAGAGTACGGGACCTGCGAATTTCCCACCGGATACTGAGTGGAGAGAGATGTATGTGGCCAGAGTTTTTAGAACCTTTCTTTCGTATTCTTCCATTCATTACACGTGTTTAG 1563 0.524 MPCFSQNQSMMAPLAFSFFFLLISFFSFTSEAGSVGINYGRIANDLPTPAKVVELLKSQGLNRVKLYDTDSTVLTAFANSGIKVVVALPNELLSNAAADQSFTDAWVKANISNYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHASLSKYNLDTNIKISSPIALSALQTSFPVSSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYTANADKISLDYALFKDNPGVVDSGNGLKYTNLLDAQIDAVYAAMTALQYNDVKITVSETGWPSAGDSNEVGASPENAASYNGNLVRRVLGQSGTPLKPNDSLDVFLFALFNENQKTGPTSERNYGLFYPSEKKVYDIPLTADGVSDAPSSGVGKSQTPVSGDVSTTSHQGQTWCVANGGSSEEKLQNGLNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARGAGTCDFGGTAYVVTQPPSKYYYHQLLFAVCLVNLCCRVRDLRISHRILSGERCMWPEFLEPFFRILPFITRV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00905 520 Gene3D - 381 473 - -
Spst8g00905 520 FunFam Glucan endo-1,3-beta-glucosidase 4 382 473 - -
Spst8g00905 520 SUPERFAMILY (Trans)glycosidases 35 352 IPR017853 -
Spst8g00905 520 Gene3D Glycosidases 33 360 - -
Spst8g00905 520 Pfam X8 domain 387 458 IPR012946 -
Spst8g00905 520 SMART X8_cls 387 480 IPR012946 -
Spst8g00905 520 MobiDBLite consensus disorder prediction 360 380 - -
Spst8g00905 520 Pfam Glycosyl hydrolases family 17 35 352 IPR000490 GO:0004553|GO:0005975
Spst8g00905 520 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 460 IPR044965 GO:0004553|GO:0005975
Spst8g00905 520 MobiDBLite consensus disorder prediction 364 380 - -
Spst8g00905 520 FunFam Glucan endo-1,3-beta-glucosidase 3 34 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00905 Spst-Chr8 7987039 7989066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00905 30 496 Glycoside Hydrolase AT5G55180 68.856 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00905 - - gmx:100803406 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00905 8 7987039 7989066 Spst8g00905 8 7987039 7989066 ECH