Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00904 ATGAAGAAAGACAACGTTAACGTGCTGTCTTTCACACTGTGTCCTGCTTTACTCTCTCTCACAGCGATCTTCCTCCCTTTATGTGAGTCCTTCAACTATAGCCAAGCCCTCTCCCAGAGCTTCCTCTACTTCGAGTCACAGCGTTCAGGACACTTACCCTACAACCAAAGGGTCACTTGGCGTCACCATTCTGCCCTCACTGATGGCCTAGAACAAGGGGTGGACTTGGTGGGAGGGTACTACGATGCAGGGGACAATGTGAAATTTGGGTTGCCCATGGCATTCACCATAACACTCCTCTCATGGGCAGTCATTGAATACGGCCAACAAATCGACACTGCCGGCGAGTATGCTCACGCGCTCGAGGCCATCAAGTGGGGGACTGATTATTTCATCAAGGCCCACACACAACCCAACGTTCTCTGGGTAGAGGTGGGTGACGGGGACACTGATCACTACTGTTGGCAGCGGCCGGAGGACATGACGACATCACGGAGAGCTTTCAAGGTTGACGCCGACAACCCCGGTTCGGATGTGGCCGGCGAGACGGCGGCGGCGTTGGCTGCGGCATCCATGGTGTTTAGGAGAACAAACCCACACTACTCTCAACTACTTTTGCATCATGCACAGCAGTTGTTTGAGTTTGGTGACAAGTACAAAGGAAAATATGATGAGAGTGTTGGAGTGGCTAAAGGGTATTATGCTTCGGTTAGTGGCTACAAGGATGAGTTGCTATGGGCAGCTATTTGGCTATATAAGGCCACCCTGAAGGACAAATATTTAAACTATTTTTTGGAGAAGGCTCATGACTTTGGGGGGACCACTTGGGCCATCACTGAATTCAGCTGGGATGTTAAGTATGCTGGTATTCAAGCTATTGCTTCCATGTTCTCAATGGAAGAAAAGAAGCATGAAGTCGTACTCAAACAGTATCGTTCGCAAGCCGAACACTACCTCTGCGCATGCCTCAACCTCAACAACGTGAGTAACGTGGAGCGCACCCCAGGAGGGTTACTGTACACCCGCCAATGGAACAACATGCAATACGTAGCAACGGCATCGTTTCTTCTCACACTGTATTCTGATCACCTCCTAGCCACACATCAGAAGCTGCTTTGCCAAAAAGGAGTGGTGGGTCCCCACGAGATGTTTGCCTTTGCAAAATCACAGGTTGATTACATCCTGGGTTCTAATCCAATGGGTATGAGTTACTTGGTAGGCTACGGTCCCAATTTCCCCCAGAGGGTGCACCATAGGGGCGCATCCATTGAATCATTAAAGGAAAACAAGGGTTTTATTGGGTGCACTCAGGGTTATGATAACTGGTATGGACGCGTTGAACCCAATCCAAATGTACTCATTGGGGCCCTGGTTGGTGGGCCTGATATCAAAGACCAATTTAAAGACGAGCGACCAAATTACATCCAAACAGAGGCTTGCACCTACAATACTGCAGCATTAGTAGGGGTTTTTGCTAGATTGCATCAATCACAAGCTCATACTTATCACAATGAAACCCCTTTGATAGCTTCTATCTAG 1539 0.488 MKKDNVNVLSFTLCPALLSLTAIFLPLCESFNYSQALSQSFLYFESQRSGHLPYNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITLLSWAVIEYGQQIDTAGEYAHALEAIKWGTDYFIKAHTQPNVLWVEVGDGDTDHYCWQRPEDMTTSRRAFKVDADNPGSDVAGETAAALAAASMVFRRTNPHYSQLLLHHAQQLFEFGDKYKGKYDESVGVAKGYYASVSGYKDELLWAAIWLYKATLKDKYLNYFLEKAHDFGGTTWAITEFSWDVKYAGIQAIASMFSMEEKKHEVVLKQYRSQAEHYLCACLNLNNVSNVERTPGGLLYTRQWNNMQYVATASFLLTLYSDHLLATHQKLLCQKGVVGPHEMFAFAKSQVDYILGSNPMGMSYLVGYGPNFPQRVHHRGASIESLKENKGFIGCTQGYDNWYGRVEPNPNVLIGALVGGPDIKDQFKDERPNYIQTEACTYNTAALVGVFARLHQSQAHTYHNETPLIASI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00904 512 Pfam Glycosyl hydrolase family 9 33 490 IPR001701 GO:0004553|GO:0005975
Spst8g00904 512 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 393 419 IPR018221 -
Spst8g00904 512 FunFam Endoglucanase 29 499 - -
Spst8g00904 512 SUPERFAMILY Six-hairpin glycosidases 30 500 IPR008928 GO:0005975
Spst8g00904 512 Gene3D - 29 498 IPR012341 GO:0005975
Spst8g00904 512 PANTHER ENDO-1,4-BETA-GLUCANASE 25 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00904 Spst-Chr8 7976877 7980042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00904 31 493 Glycoside Hydrolase AT2G32990 74.678 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00904 - - gmx:100786912 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00904 8 7976877 7980042 Spst8g00904 8 7976877 7980042 ECH