Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00842 ATGGAAGAGGCAGATCTTGACTTCTCTCTTGAGTACGGATTCGAAGGACATGGTCATCTTCTTTGCAATCTAGTGGAAGGTGTCTGTGCTGCTAGAGTTTTGGCCATGGTTAAGATTAATGGGTTTAAAGGAACTGATGAGATTCTTGTGCTCAAGTGTTTCATCAATGGTGGAGTTTTCTTGAAAAAGATTCGCATAAACATGTTAAAGGATGGTTTCGGACGGACTGTGGAGTTCCATTGCCGTGAAAAGGCAGAATTTCTGTTGACAATTTGTAACAAGTCCGACGACGTCTCCAAGATTTTGTTACCATTGGAGTTGCTTTTAATCATTGTTTCATTCCTTCCCTTCAAGGAAGCGGTGAGAAATTCTGTCCTCTTTAAAAATTGGTTCAAGGCATGCAAGTCCACCAAAAACGTAGAGTTCAATGAACTCTTTTTCGTTAAACCGGACCAATCTTCTGAAACAAGAGAAGCCCAGAGAACGGCTTTTCTTGACTTCATCAGAATTTGGATCGCAAACCACAAAGGAGCTGACTTGGACAAGTTTTCTTTGAAGTTGTCGATAATAGGAAACGTGGGTGAAATCATTGATCAATGCGTTGATTTTGCCACACGACGTGAGGTGAAAGAATTGGAACTTGACTTTACTGATTCGAGTTGGGATATGCATGAAGACTACTTTGCAGATTATGAGGCACCGTTTGAATTGCCAAGACAGACTTACGCACATATTGGTCTTGAGTATTTAAAATTATATTCGTGTAGTTTTCTTGAGACTGAAGTGCGTAACTTTCGTGTACTCAAAGAAGTTTCTTTGGGTTGGATGAAAGTGAGTCTCACTGCTATTAAGGCTTTGCTTTCAAACTGTGAAATGCTTCGGAGTCTGAGTTTTAAAAGGTGTTGGAACGCAGAAAGTTTTCACCTAGGGCAAGAAGAGACCGCGGGTCTAAGAAAGTTTGTCATTGAACGTTGCCGTTTTGGATTTGATTCTTTCAAGGTCAATGCACCGAATCTCAAAATTTTCAAGTACTTCGGGCGGATGAGATTCAATATAATGACAGAAATTCATTCAACTGAAATGGAAGAGGTGGATCTTGACTTCACTTTTGAATATTTATATCAAGGATATGGTCACGCTCTCCACTGTCTGCTGAAACAGCTCTCTACTGCTAGAGTTTTGACTGTATGTAGTTATATGCTTCAGATTATCCCTAGTGGACCTGAACAACTACAAATGGAGCATAGCATGCATGTACGACATTTGATCATGAAAGCGTCCTTGCACGAGGATGAGTTGTTAGGAATCGCATTCTTCCTCAACAGCTGCCCTATATTAGAGTGTCTCACCATTCAACTGTGTTTAAAAAATGATCTGTCTGATAATGAAGAACCATTTTATTTCAACCTCATGCGATTCTGGGTTGACTTTTTGGGAGATTGCGAATGCTTGAGATCAAGTCTGGAAGTGGTGGAGATTAATGGCTACAGAGGAGAGATGAATGAGAATCTTCTGCTCAAGTATTTGATCTTTAGTGGACTTCTCTTGAAAAAGATGAATATAAACTTGTTGAGGGATGAGTCCGGTAGGCTCGTGGAGTCTCACAGTCGTCAATATGCAGAAGATCTTTTCACAATTCACAGGGCTTCAATAGACTTAGAGATATCAATATATTAG 1677 0.4007 MEEADLDFSLEYGFEGHGHLLCNLVEGVCAARVLAMVKINGFKGTDEILVLKCFINGGVFLKKIRINMLKDGFGRTVEFHCREKAEFLLTICNKSDDVSKILLPLELLLIIVSFLPFKEAVRNSVLFKNWFKACKSTKNVEFNELFFVKPDQSSETREAQRTAFLDFIRIWIANHKGADLDKFSLKLSIIGNVGEIIDQCVDFATRREVKELELDFTDSSWDMHEDYFADYEAPFELPRQTYAHIGLEYLKLYSCSFLETEVRNFRVLKEVSLGWMKVSLTAIKALLSNCEMLRSLSFKRCWNAESFHLGQEETAGLRKFVIERCRFGFDSFKVNAPNLKIFKYFGRMRFNIMTEIHSTEMEEVDLDFTFEYLYQGYGHALHCLLKQLSTARVLTVCSYMLQIIPSGPEQLQMEHSMHVRHLIMKASLHEDELLGIAFFLNSCPILECLTIQLCLKNDLSDNEEPFYFNLMRFWVDFLGDCECLRSSLEVVEINGYRGEMNENLLLKYLIFSGLLLKKMNINLLRDESGRLVESHSRQYAEDLFTIHRASIDLEISIY 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00842 558 Pfam FBD 481 521 IPR006566 -
Spst8g00842 558 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 103 551 - -
Spst8g00842 558 Gene3D Ribonuclease Inhibitor 207 465 IPR032675 -
Spst8g00842 558 SMART 9598neu4hmm 482 558 IPR006566 -
Spst8g00842 558 SUPERFAMILY RNI-like 242 459 - -
Spst8g00842 558 SUPERFAMILY F-box domain 102 138 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00842 Spst-Chr8 7551843 7557129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00842 103 306 EF-hand Containing Proteins AT5G41840 22.488 5.16e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00842 - - gmx:102659419 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00842 8 7551843 7557129 Spst8g00842 8 7551843 7557129 ECH