Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00589 ATGAATCCTGGAAATTTTGAGGAGGAGGAGTCTTCCAATTCATCTGATCAAGTGAGTGACTATCTAGCCGAGTACACATTGGAAGGAAAATGGGATAAGGTTGTGGACATGTACAAACAATCCCCAGCGTGTCACACGGCAATGATTAACGATGCCGTGGGCACTGCACTGCACGTGGCCGTGGATTTGGACGAAGAAGGTGTGGTTCAAGAACTTCTGGATGCGATTATCAGTCACAGCGATGAAGTGAAGATCAAGGCTCTGGAAATGGGGAACGATCGAGGGGACACACCTCTGCATGTTGCGGCTTCGAGGGGTTTCGCAAAGATATGTAGATGGATCATAGGAATGGAGAAGGAGAGGATGTATTTGGTGAGTAAAAAGAACAAACATGGAGAGACACCTCTGTTTGAAGCTGCTATCAACTGGAAGAAACAGGCCTTTGCTTATCTTTCTGACGTCTTGGGCCACAGCGCCCCCTTGCAAGATCTTGTGCGACACAATGGTGACACTATTCTTCACTGTGCTATCAGTAGAGAATATTTTGATCTGGCTGTGATAATAGTGCATTATTATGATTTCCTTAGCACACATAAGAATAAAGAGGGATTGACTCCTCTCACAGTCCTTGCCACTAGGCCCTCGGCCTTCAGAAGTGCTACCAAACTTTCATGGTGGAAGCGAATCCTCTACCACTGTATACTTGTAGAACCACTACTGGACCCTGAAAGACAAATGAAGGCGAATCTCGAAAAGATGAAGGAGAATCCCAACTCTGATAAAGTGGATTATCCAAAGAACTACGCCACATTATATGATTTCTTTGCTGGGTCGTTAAGTGTATTTGGAAAAATTCCCACGAAAAATAATCAGCATGACTCAGAAAACCCATCCTTAAAGTGTACAATTGGATTTGGAACTCCCAAGGTTGGATTTTTACCACCAAATTATGAAACCGCTCAACAATTTATTAGGTCCTCATATGTACATTCTCTTGGCCTCTCAGGAGTGGCATTGAAGGAAATAAAGAAGACAAAGAAGAGGCATCAATGGAGTGGTCAACTCTTGAAGGCACTACTGGAAAGACCTTATGCAGCATTCACAGGAAGTGGAGGTGTCCCAACCGATATCAAAGTCGAAGCAGATATGTACAATGTTTATAACCAATATAAACAAGGTGAAACCAGTGAATTGGGATGGTTGGAAAAGAAAACAGAGGTTGATGACAAAAGCCCTGAAAGTCGAAGTGAGACGACGAAGAAGGAAACGGGTGAACAAGCTAAAGAAGGAAAGATTGACAAAAAAGAGACAGCATTTCTGGTTGCAGCGAGAAATGGCATAGTTGAAATGGTGAATGAAATTTTATGCCGAATTCCAAGTGTCATCCATAACACTAACGCAAAGAAAGAAAATGTGCTGCTTGTGGCTGTGTTGAATAGGCAACCCCTTGTTGTTGAGAGTTTAAAAATGAAGATGCAGTCAAAACCAGAAGTTTGGAATAACTTAATTCTGACAGCAGATGAAGATGAGAACACAATGTTGCACTTGGCAGCATATGCTCCTGGAGGCGATAAACCTTGGCAGATAGCTGGTTCTGCCTTACAAATGGTGTGGGATATAAAGTGGTTTCAGTATATTAAAAGCCTGGTGCCACAACACTTTTACTTCAGAAGCGACAAGAAGGGCAAAACCGCAGGGGAAATCTTCGAGGATACACATAAAAAACTGATAAAGGAGAGTGGGGAGTGGCTGAAGGATACATCTGAATCGTGTTCTGTTGTGGCTGCACTTGTCGCTGGTGTTTCCTTCACAGCAGCCAGCAGCATCCCTGGTGGCACCAACGATGAAGGTAAGCCTAACTTAGAAGGCAAGCCTGCATTCGATGCATTTGCCATTGCTTCGCTTATTGGACTTTGCTTTTCCGTCACTGGTCTCATAATGTTCCTTACCATCCTCACTTCTCGAAAGCAAGCCAAAGATTTTCGCAGAGATTTGCCACTCAAACTTCTTCTTGGCTTGAGTTCTCTTTTCGTATCCATTGCTGCAATGTTTATTTCTTTCTGCACCGGCCATTTTTTTCTTCTTAGTCACAGATACAAGACGGTCCTATACCCCATTTATGCAGCCACTGTTTTTCCTGTAACTTTCTATGCTGTGGCACAGTTTCCTCTATACTTTGATCTTCTAACGGCCATTTTAACTACGGTTCCACGACCAAGTGATAAAGGAGACAAGTTATAG 2241 0.432 MNPGNFEEEESSNSSDQVSDYLAEYTLEGKWDKVVDMYKQSPACHTAMINDAVGTALHVAVDLDEEGVVQELLDAIISHSDEVKIKALEMGNDRGDTPLHVAASRGFAKICRWIIGMEKERMYLVSKKNKHGETPLFEAAINWKKQAFAYLSDVLGHSAPLQDLVRHNGDTILHCAISREYFDLAVIIVHYYDFLSTHKNKEGLTPLTVLATRPSAFRSATKLSWWKRILYHCILVEPLLDPERQMKANLEKMKENPNSDKVDYPKNYATLYDFFAGSLSVFGKIPTKNNQHDSENPSLKCTIGFGTPKVGFLPPNYETAQQFIRSSYVHSLGLSGVALKEIKKTKKRHQWSGQLLKALLERPYAAFTGSGGVPTDIKVEADMYNVYNQYKQGETSELGWLEKKTEVDDKSPESRSETTKKETGEQAKEGKIDKKETAFLVAARNGIVEMVNEILCRIPSVIHNTNAKKENVLLVAVLNRQPLVVESLKMKMQSKPEVWNNLILTADEDENTMLHLAAYAPGGDKPWQIAGSALQMVWDIKWFQYIKSLVPQHFYFRSDKKGKTAGEIFEDTHKKLIKESGEWLKDTSESCSVVAALVAGVSFTAASSIPGGTNDEGKPNLEGKPAFDAFAIASLIGLCFSVTGLIMFLTILTSRKQAKDFRRDLPLKLLLGLSSLFVSIAAMFISFCTGHFFLLSHRYKTVLYPIYAATVFPVTFYAVAQFPLYFDLLTAILTTVPRPSDKGDKL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00589 746 MobiDBLite consensus disorder prediction 403 429 - -
Spst8g00589 746 PANTHER CASKIN 49 732 - -
Spst8g00589 746 Gene3D - 415 528 IPR036770 -
Spst8g00589 746 Gene3D - 13 243 IPR036770 -
Spst8g00589 746 SMART ANK_2a 434 464 IPR002110 GO:0005515
Spst8g00589 746 SMART ANK_2a 94 124 IPR002110 GO:0005515
Spst8g00589 746 SMART ANK_2a 168 199 IPR002110 GO:0005515
Spst8g00589 746 SMART ANK_2a 52 81 IPR002110 GO:0005515
Spst8g00589 746 Pfam Domain of unknown function 582 693 IPR026961 -
Spst8g00589 746 SUPERFAMILY Ankyrin repeat 44 215 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00589 Spst-Chr8 5576037 5580285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00589 436 719 Miscellaneous Gene Families AT3G12360 23.476 6.13e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00589 - - gmx:100799438 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00589 8 5576037 5580285 Spst8g00589 8 5576037 5580285 ECH