Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00551 ATGGCCGTATCTGTGGACCCGCCAGCCCTTTTCGACCCGGTTCGCAACTCGGCCCCGCGACACCATCATCACGCATCCTTCCTCCTTCATCCTCGGACCGAGACTCCGAAAATCGCCGCAGTCGGTTTCCAGACGACACCGATGGTGAAACCGGAGCCTGGTGTTGGACCCAGAAATCCGGGAATTAGAAGATTTGGGTTGAGAGCTGAAATTGATACTTCTCCGCCGTTCGGGTCTGTCAAGGAAGCGGTGACACATTTTGAACGAGCCGGACCTAGGAGCTTTCACAAATTTGGAGAGGCTCAAGATTTTGACATAAAAAGAGTGGAAGAAGAAGCAGCAAAGTTGGAAAAGGATTTGATAGTGAAAGAACTTGAAACACTTGATGTGCTTGAAGAACTGGGAGCTACCAAAGCAATTTTGGAGGACTTAAAGTTGCAGCTACAATCAGAAGCATTGAATTGTTTTGCAACTCGAGGTGAAAATTCATGTGAACAGGTTGGAGCTGCTGTTAGAAATTGTGTGAATGGTATCAACAATGAAGAACAGACATTGCAAAGTTCGAGTCCATGTGCAACTTCATCACCTGATCTGTTCTTAGTGGAGTTAAGACAAGCTAAAATGAGCCTTGGTAAAACCATAAATGATCTTGGAGTGATACAATCTTCTGTTGAAACTTTGAATAAGAAGATGAAGAAGGAAAGGCTTTTTGTTGAGAGGACACGGGAGAAGCTAGCATCGAAGTTTGCAGCTGTCTCTACTGAAGAAGTTACCAAAACAGAAGCAAGGTTTAATCCACCTGAAGCTACTGTAGGAACAGGGAGGAGTTTTGAATTTGATACTGGACAGTGCAATGGAATGAGTGAAACAAGAAGCTCTGAAGTTTTAAGGCCCTTCTCTGAGTTTGGAGATAATGGATTTAGTATTAAGACTGCTGAAATGAGGTGGTTTGCGGCTAAAAAGATGGAAGAAGCTGCAATGGCAGCAGAAGCCGTTGCTCTTGCTGAAATTGAGGCCCTGTGTTGCCCTGAGATATCATCTGAATTTGCTCTTCCAGAACATCAGAAAATGGTCTTTGCCTTACGGGAGAACTCTCCTCTAAATCCTGTTGGTCAAATTCCTCAGGAGTCAACCTTGAAGACGATAATAGATTCCAAGTTCCAAATGGACAAAGTAGCTATTTCTAAACTGGGTATTTTGAAGAAGTTTGAGGAAGCAACAGAAGAAGTTCTACGCAGCAAACAAGTCTTGGCTGAGGCATTAAACAGTGTTGAAAGTGCAAACAGAAAACAGCTTGCTGCTGAAGAGGCTCTTCGTAGATGGATTCCCGAAGATGATCTAAAAGGAAAGCCATTGATTGAGAGCAGCATGTTTAATCAAGCTGGAAATTGTCAAGATTCTCCTCTACCAGATGTAATCAGATCGATTACAACTAGCAATGACCCGAAGCAGACCTTAAGGTCTACGGTTTCAATGAGAGAGGTACTTAGTAGAAAGCAAGTTCCTGAAGATTACACTACGACAAAGGATATGGAAGAGCACTCTGAAAGGAAGGTAGCATTGAGTCAAATGCTTCGAGCATTGAGGAAGGATCAAACTCTACCTACAATACCTGAGAAAGATGGGAGCATTAATCAAAAGCAAAAGCATGTCACAGCACCTAGGAAAAAGTTTAGTTTCATCCAAATATCATTCCCCTTGGGAAAGCGAAGTAAGAAGACATGA 1725 0.4319 MAVSVDPPALFDPVRNSAPRHHHHASFLLHPRTETPKIAAVGFQTTPMVKPEPGVGPRNPGIRRFGLRAEIDTSPPFGSVKEAVTHFERAGPRSFHKFGEAQDFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEDLKLQLQSEALNCFATRGENSCEQVGAAVRNCVNGINNEEQTLQSSSPCATSSPDLFLVELRQAKMSLGKTINDLGVIQSSVETLNKKMKKERLFVERTREKLASKFAAVSTEEVTKTEARFNPPEATVGTGRSFEFDTGQCNGMSETRSSEVLRPFSEFGDNGFSIKTAEMRWFAAKKMEEAAMAAEAVALAEIEALCCPEISSEFALPEHQKMVFALRENSPLNPVGQIPQESTLKTIIDSKFQMDKVAISKLGILKKFEEATEEVLRSKQVLAEALNSVESANRKQLAAEEALRRWIPEDDLKGKPLIESSMFNQAGNCQDSPLPDVIRSITTSNDPKQTLRSTVSMREVLSRKQVPEDYTTTKDMEEHSERKVALSQMLRALRKDQTLPTIPEKDGSINQKQKHVTAPRKKFSFIQISFPLGKRSKKT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00551 574 Coils Coil 131 151 - -
Spst8g00551 574 Coils Coil 511 531 - -
Spst8g00551 574 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 191 495 - -
Spst8g00551 574 Coils Coil 417 437 - -
Spst8g00551 574 Coils Coil 106 126 - -
Spst8g00551 574 MobiDBLite consensus disorder prediction 535 555 - -
Spst8g00551 574 Pfam Weak chloroplast movement under blue light 308 444 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00551 Spst-Chr8 5178449 5181142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00551 - - gmx:100781281 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00551 8 5178449 5181142 Spst8g00551 8 5178449 5181142 ECH
Spst8g00551 8 5178449 5181142 Spst8g00551 8 5178449 5181142 PCT