Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00538 ATGGTTTCGGTTGATAATGGTAAAGATGAAATTGAGGAATCTAATGGAAGTAAAGTCAATGAGTTTGCTTCCATAGATATTTCAACTTCTCGAAGAACACTCGTGGGAAATGAAAACCCTCAGAGAAAATTCCAGGGCACCTTGGGTTCTATTCCCAATAGGATCAACTTCTTGAAATTTGGGTCTGCATCTGCCAAATTCAAGCGGCTTGCAACAGAAAAGGACCAGATTTCACAGGCCGTGCCTTCGCCGGGTTCTCTTCGCTTGAGGGAGCGCTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGGTTCGCTCCAGAAGATGTGTGCTGAATGGATTAAGGACCCAATGAACATAGCCCTTTTTGTCTGGATCTTGTGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAACGGTGTGCTTCCGAGGAAGTCTGATAGAAATGCGTGGTTTGAGGTGAACAATCAAATACTCAATGCACTGTTTACACTGATGTCTTTGTATCAGCATCCAAAGAGGTGCTACCACCTTGTGCTTCTGTGCAGGTGGAGTCCACAGGATATCTCAAAACTTAGAAAGGTGTATTGCAAGAATGGGACTTATAAGCCCCATGAGTGGGCACACATGATGGTAGTGGTCATTCTCCTTAATTTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTGGGGTATAAAAGATCTGAACGCCCGGCCATAGGAGTTGGAATATGCATATCTTTTGCTATTGGTGCGCCTGCAGTCGCTGGTCTATATTCCATTCTTAGCCCTCTAGGTAAAGATTATGATTCTGAGATGGATGAAGAAGCACAGGTTCAATATTCTGGTGCTCAGAGGCAAGAGCAGCTGAGAGTGAAATCATTTCAGAAGAAATATTCATTTGCATCCAGACAGCAACAAAGGGTTATTGAAAATAGACCACAGTGGAGTGGAGGAATACTTGACATTTGGAATGACATTTCTCAAGCATATCTATCACTTTTCTGTACTTTTTGTGTCTTTGGTTGGAACATGGAAAGACTTGGCTTTGGAAACATGTATGTTCACATTGCTACTTTTATGCTGTTCTGTATGGCTCCCTTCTGGATCTTTACCTTGGCTGCGGTTAATATTGAGGATGACACTGTTAGACAGGCTCTAGTAGCTACTGGGATCATTCTGTGTTTTTTCGGTGCACTTTATGGTGGCTTTTGGAGAATCCAAATGAGAAAAAGGTTCAATTTACCTTCTTATAACTTTTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGCTCTGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGTAAGGACGACGAATAGCTATGACATTGTAGAAGACAAATTATATAGGAAAGAAGGTTCTTCTAGTGACCAACAGCCAATGTCACCTTTGCCTCGTGAAGATGTGGCATCAACCAAATCTGGCACAAGTTCTCCTTTGGGTAACAACTCTTCCCCTTCTATGATCAAGCCATCTAGTCCTCTAAGTTCAAGCAGTTTCTTGAAGGAAAATCGTAGTCCAGAGAGGTCACTATATACTGTGAAAGAAGAGCTTTCTGAAAGAGGTAAAGATGAGACAATGAATCCACCTATTCCACCATTAATACAAAGGGAATCTCCTTAG 1677 0.4222 MVSVDNGKDEIEESNGSKVNEFASIDISTSRRTLVGNENPQRKFQGTLGSIPNRINFLKFGSASAKFKRLATEKDQISQAVPSPGSLRLRERFSGMFAKKLDWGSLQKMCAEWIKDPMNIALFVWILCVAVSGAILFLVMTGMLNGVLPRKSDRNAWFEVNNQILNALFTLMSLYQHPKRCYHLVLLCRWSPQDISKLRKVYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNLGYKRSERPAIGVGICISFAIGAPAVAGLYSILSPLGKDYDSEMDEEAQVQYSGAQRQEQLRVKSFQKKYSFASRQQQRVIENRPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFTLAAVNIEDDTVRQALVATGIILCFFGALYGGFWRIQMRKRFNLPSYNFCFGKPSASDCTLWLCCCWCSLAQEVRTTNSYDIVEDKLYRKEGSSSDQQPMSPLPREDVASTKSGTSSPLGNNSSPSMIKPSSPLSSSSFLKENRSPERSLYTVKEELSERGKDETMNPPIPPLIQRESP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00538 558 NCBIfam uncharacterized Cys-rich domain 323 457 IPR006461 -
Spst8g00538 558 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Spst8g00538 558 PANTHER PLAC8 FAMILY PROTEIN-RELATED 2 556 - -
Spst8g00538 558 Pfam PLAC8 family 324 454 IPR006461 -
Spst8g00538 558 MobiDBLite consensus disorder prediction 469 558 - -
Spst8g00538 558 MobiDBLite consensus disorder prediction 526 542 - -
Spst8g00538 558 MobiDBLite consensus disorder prediction 487 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00538 Spst-Chr8 5093736 5095412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00538 - - gmx:100795088 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00538 8 5093736 5095412 Spst8g00538 8 5093736 5095412 ECH
Spst8g00538 8 5093736 5095412 Spst8g00538 8 5093736 5095412 PCT