Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00524 ATGTCTGAGTTTGATCCTAAGAAACCCTCCGTGCCCATATCGTATCCAATCAAGACCCTGAAGGAGCTGGAATCACGCTCCTACTTTGAGTCCTTTCACTACCCTTTTAACAAAGCTTCAGTTCCCATCGAAAGTGGGTATTCTGCATCATTACCTAATCGTAGAAGAATACTGGTGTGCCATGATATGGCTGGAGGGTATTTGGATGACAAGTGGGTCCAGGGAGGCTCTAATGCAGATGCCTATGCCATATGGCATTGGCATTTGATAGATGTGTTTGTTTACTTCTCTCACTATCTTGTCACTCTCCCTCCTCCTTCTTGGACTAATACAGCTCATCGTCATGGTGTTAAGTTCTTGAATTTTGTCAGGGTTTTGGGGACTTTTATCACCGAAGGTCGTGAGGGAACTGCTCTCTGTGATGAACTGCTTGCAACAAAGGAGTCTGCCCGAATGTATGCAGAACACTTGGCAGAGCTTGCTGTTAATTTAGGCTTTGATGGGTGGCTGTTGAATATGGAGGTAACATTGCCGCCAAAACAGATTTCTAATTTGAGAGAGTTTGTCAACCATTTATCATTAACAACACATTCTTCAGTCCCAGGATCACTAGTGATATGGTATGACAGTGTCACTATTAACGGTGATCTATGGTGGCAAAATGAACTAAATGAAAATAATAAACCTTTCTTTGATATATGTGATGGGATATTCACAAACTATTCATGGCAGGAAGACTATCCAAGTCGATCTGCTTCTTTTGCTGGTGATAGAAAGTTTGACGTGTACATGGGGATTGATGTATTTGGAAGGGACACATATGGTGGTGGACAGTGGAATACAAACGTTGCTCTTGATCTAATAAGAAAAGTTGATGTCTCTGCTGCAATCTTTGCTCCTGGATGGGTCTACGAGACTAAGCAAGAACCAGATTTTGAGATTGCACAGAATCGTTGGTGGAGTCTGGTGGAAGAATCTTGGGGCACAGTGCGAAAGTATCTTAGAACACTGCCATTCTACTCAAATTTTGATCAGGAATTCCCTTTGGCATACTTACTGGGACGCGGTTATCATATTTCAGTTGATGGAGACCAAATATCAGATGCTGCTTGGTGCAATATTTCTTTTCAAGGTGTTCAGCCACTCCTTGAGTTTGCTGATTCTACTGCAAATTCTCTTCAACTTCTTGTAGACTTGAAGGAGGCATCATATAGTGGAGGGGGAAATATTACATTCAAAGGATCTCTTGAAAAGGATGCTTACTTCAAGAGGAGAATCTTTCAAGGAGAGTTCATTTTAAGCGAATTGCCTATCCACTTCTTTTATTCTGTGAAATCTGATGGCAATTCTTCTTTGGGAATCGTGCTTGAGTTCATTTCTACCATGAACAAATCGATGTCTATACTACTCACTTCCCATGGAATGGATCATCTGTCAAGCGCATTTAGCAAAATAGTCAGAACAAGTGAACAAAAGGGAAATGCCCCTGGATGGATCATACATGAAGGTACAATTGAAATGAATGGATACGTTCTGACTGAAATCCATGCTTTGTGCTATAGATCAAATGCTGCATCCAAAGAACTGGGACTGAAATCCAGACCATTAGGTCCTGATTATACTGTGGCTTCCTCGACTGATTATTTTGCGGTTCTTGGTCATGTCATAGTCAAGACTTCCAACTATAAGCCAGAGTTTCCAGTTTCTACATCCTGGCTAGTTGATGGTGAATTCATCAATTGGAACTCTGGTCCTCAGAATTCAAAGATCCTTAGTGTTAAAATCTCTTGGAAGCTGAAAGAAGGAAAGAAATTTGTATTTCTACACTACAATGTGTATGTGGAGAAACTGCCAAAGCTAGCAGATGGTAATCCAAGCACAACATTAGAACATGTGCAGGAGTATCTTGGAGTAGCACATGTAAACTGTTTCTATGTTTCTGAGCTCAACGTTCCTCCTAGAATTTCTAGTCTCAAATTTATCATACAAGTCTGCGGTTTTGATGGGACAAATCAGAATATAGAAGAGTGTCCATTCTATCAATTGGAGATAAAAGGTCAATAA 2064 0.407 MSEFDPKKPSVPISYPIKTLKELESRSYFESFHYPFNKASVPIESGYSASLPNRRRILVCHDMAGGYLDDKWVQGGSNADAYAIWHWHLIDVFVYFSHYLVTLPPPSWTNTAHRHGVKFLNFVRVLGTFITEGREGTALCDELLATKESARMYAEHLAELAVNLGFDGWLLNMEVTLPPKQISNLREFVNHLSLTTHSSVPGSLVIWYDSVTINGDLWWQNELNENNKPFFDICDGIFTNYSWQEDYPSRSASFAGDRKFDVYMGIDVFGRDTYGGGQWNTNVALDLIRKVDVSAAIFAPGWVYETKQEPDFEIAQNRWWSLVEESWGTVRKYLRTLPFYSNFDQEFPLAYLLGRGYHISVDGDQISDAAWCNISFQGVQPLLEFADSTANSLQLLVDLKEASYSGGGNITFKGSLEKDAYFKRRIFQGEFILSELPIHFFYSVKSDGNSSLGIVLEFISTMNKSMSILLTSHGMDHLSSAFSKIVRTSEQKGNAPGWIIHEGTIEMNGYVLTEIHALCYRSNAASKELGLKSRPLGPDYTVASSTDYFAVLGHVIVKTSNYKPEFPVSTSWLVDGEFINWNSGPQNSKILSVKISWKLKEGKKFVFLHYNVYVEKLPKLADGNPSTTLEHVQEYLGVAHVNCFYVSELNVPPRISSLKFIIQVCGFDGTNQNIEECPFYQLEIKGQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00524 687 Gene3D - 336 505 - -
Spst8g00524 687 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 3 680 IPR032979 GO:0033925
Spst8g00524 687 FunFam cytosolic endo-beta-N-acetylglucosaminidase 6 332 - -
Spst8g00524 687 Pfam Glycosyl hydrolase family 85 67 345 IPR005201 GO:0005737|GO:0033925
Spst8g00524 687 CDD GH85_ENGase 58 386 - -
Spst8g00524 687 Gene3D Glycosidases 6 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00524 Spst-Chr8 4935211 4944634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00524 8 685 Glycoside Hydrolase AT5G05460 52.047 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00524 K01227 - gmx:100806533 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00524 8 4935211 4944634 Spst8g00524 8 4935211 4944634 ECH